Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00051 ATGGGTGCTGCACCTGATGCGGGTCAGCTAATGGCCATGTTCTTGAAGGTTTCGAATGCTAAAAAGACAATAGAAGTTGGAGTTTTTACTGGATACTCTCTTCTCCTCACTGCACTCACAATTCCAGATGATGGAAAAGGTGCCACAGACGTTCGTTCAAGCCTTCGTTCTTCTCGTTCGTTCAAGCCTTCTCTGTCGTCCGTCTTCTCTCTCGCTGTGTCGTCCGTCTTCTCGTTCGTTCAAGCCTTCGTTCTCTTGCCGTGTTCGAAGCTTCCATCCTCGGTTTCGTTCTGTCCTCCTTCTTCAAAACGTGCGTTGAAACCCTTACATTTTGGTGTAAGTAAAAATGGGCGAGCCCTGACATTGGCCGTTGCAATGGAAGGGAAAAAAGCAAGTTGGCGACTTCTTATCTCGATGGATTCATCCATCATTATTGAAATGAATCGTTTGCTCCGACAGTGTCATGTGGATCGGATTAGGATGACACCATTTATGTGGTGTGTGAATATTAATAACCCTGTGGAGGTGAATTTAAAATTATTGAAGGTTATGGTTAGCAGGTGGGTTGGAAATGATAACAGTTTTAGAGTTCGTCAAAAGTTGGTGCCGTTTAGAGTTGTTGATGTGTTGATGAGCTTAGGTTTAGAAATAGGTGGTTTAGAGATTCCCTTTGATGAAGTAGTTGGTGGATTGGTTGGTGAATTGTTCAAATCAAAAACCATCAGTTTGAAGGACTTGACAGACATGTTTAATGTCATTGTTGATGATAAAAACATTGAAGTCGATGTATTAAATATGGAGTGGTATATACGAAATGAAGATCGTCATAGGCCGGAAATCCGTGCAGCCTTCAACATGGATGACGGAGGAATGAGTGAAGGATCCAAGGTTGACCAAGACGATGATGAAGACGAAAGCTCTGATGACGGGGCATGGGAAGCAGTTGCGGAGGAGAGATTGAGGAAAAATAACGAACATATCAGAGCATTGAATGCCAAGATTGGAGTTCTGACTAGGGAGCTATTTGAAATTTATCAAAATCCAATCTTTCATGAAGAAGATGCATGTGCCACTGATGAAGAGGTTGGGGGTGGAGTTGGAGGTGAGGAGAATGCTCAAGTTGGGGGAGAAGAAGAAGGTGATGGACATGGAGTTGGAGGTGAGGAGAATGCTGAAGTTGGGGGAGAAGAAGAAGGTGATGGAAATGAAGTTGATGACCCCCTAGGTGCACATGCCGAAGTAAGAGGGGATGATGAAACTGTTCGTAACATTAATTTTATTGAAATAGAAGATGATGCTGATGAAGGAGAACCAGAGGTCGTTCCATTGGCTATACCCCCATTGCGGAGTTTTGTTGGTGATCCAAGCACTAGTGTTGATGTTAACCAATTGTATACAGCAGTCAGCATCAGAGAGATGAACGTACACAGGGTTGTAAGCGAGATAATTGGCCAAAGCTTGAGCACGACTTCAATTTACACTTTGGCCCCATTGAAATACGTTGATAACATGGTGGTGTTCTTTGCTTGTACGGTCTTTATGTACTTTGAGAAAAGGTTGTGCGGTGTTGTTAAGAGGTTTCATTTTAGTCCGTTATACTCGCACCATATTCTTACAGATTATAGGAAACGTCCACAGAATCGCCATGTATTCACGCTTCATAACTATAACACTTATTTGCGTTCCGATCATTTTGGACTTGAAGAATTACCCACGGCGGACTTTTTGTTTCTGCCATTTGTCCACGATGATCATTGGTGGTGTTATTCAGTGAAGTTGAGGTCAATGGAGATTTTTGTGATCGATTCATTGGGGAAGGGGATCAGAGACCGCAAAAGGATAGACACAGCCGTTGCTGAAAATATGGCACGGTTTTTTTGCATCCTGATGAATATACCGGAAGGTAGTATTGCTCCTTTGACAGTTAAACAAGCAAATATCCCATCCCAACCAAACTTACATGATTGTGGAGTAATAATGTTGAAAGCAATGGAAATCTGGGATGGAGATGAAAAATACAACGGGAAAAGCATGCCTGAATATACAACTGAGGAGCTGCTTGGGATTAGAAAGAAATATGTGTGTGACTGGATCCTGGACAACGAGAACACTAGCAGAATGGAAGCCCTATATCTATACGACATTGTCTAG 2151 0.4263 MGAAPDAGQLMAMFLKVSNAKKTIEVGVFTGYSLLLTALTIPDDGKGATDVRSSLRSSRSFKPSLSSVFSLAVSSVFSFVQAFVLLPCSKLPSSVSFCPPSSKRALKPLHFGVSKNGRALTLAVAMEGKKASWRLLISMDSSIIIEMNRLLRQCHVDRIRMTPFMWCVNINNPVEVNLKLLKVMVSRWVGNDNSFRVRQKLVPFRVVDVLMSLGLEIGGLEIPFDEVVGGLVGELFKSKTISLKDLTDMFNVIVDDKNIEVDVLNMEWYIRNEDRHRPEIRAAFNMDDGGMSEGSKVDQDDDEDESSDDGAWEAVAEERLRKNNEHIRALNAKIGVLTRELFEIYQNPIFHEEDACATDEEVGGGVGGEENAQVGGEEEGDGHGVGGEENAEVGGEEEGDGNEVDDPLGAHAEVRGDDETVRNINFIEIEDDADEGEPEVVPLAIPPLRSFVGDPSTSVDVNQLYTAVSIREMNVHRVVSEIIGQSLSTTSIYTLAPLKYVDNMVVFFACTVFMYFEKRLCGVVKRFHFSPLYSHHILTDYRKRPQNRHVFTLHNYNTYLRSDHFGLEELPTADFLFLPFVHDDHWWCYSVKLRSMEIFVIDSLGKGIRDRKRIDTAVAENMARFFCILMNIPEGSIAPLTVKQANIPSQPNLHDCGVIMLKAMEIWDGDEKYNGKSMPEYTTEELLGIRKKYVCDWILDNENTSRMEALYLYDIV 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00051 716 Pfam Ulp1 protease family, C-terminal catalytic domain 553 666 IPR003653 GO:0006508|GO:0008234
Vian5g00051 716 SUPERFAMILY Cysteine proteinases 476 694 IPR038765 -
Vian5g00051 716 Gene3D Vaccinia Virus protein VP39 1 70 IPR029063 -
Vian5g00051 716 ProSiteProfiles Ubiquitin-like protease family profile. 485 667 IPR003653 GO:0006508|GO:0008234
Vian5g00051 716 PANTHER O-METHYLTRANSFERASE-RELATED 1 51 - -
Vian5g00051 716 MobiDBLite consensus disorder prediction 283 310 - -
Vian5g00051 716 Pfam O-methyltransferase 1 46 IPR002935 GO:0008171
Vian5g00051 716 Gene3D Adenoviral Proteinase; Chain A 458 700 - -
Vian5g00051 716 MobiDBLite consensus disorder prediction 359 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00051 Vian-Chr5 842114 845827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00051 1 46 Monolignol Biosynthesis Gene Families AT4G26220 78.261 8.51e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00051 - K00588 var:108320067 594.349