Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00046 ATGGCAAAGTCCAAGAACAATGCCAAGAAGTTGTCTTACATTTCAGTCCCTTCTCAGATCATCAACTCCATATCGTCTTCTTCTCTTCAATCCTTGCTCGAATCTCCCAAGAAATGTGCAAGACATTCCAAAGTCTTCAGCTTTGTCAAATGGGCCATGATCAAGCTAGGCTTCAATCTGGACACCCCATTTCCTCCCTTCCCTTGTGCAACCTCAGTAGGCTTCTCAAAATCCATGCCCGGAGTTGTGTCACAGGAGGGTGGTATTTTGGATGGTGCAGATGACACTGTTTCAGAGCCTCTGATTACCAGTGTGCAGTTACATGCACAGGTTCCAAGAGGAGTGGAAACCGTTGAAGAGGTTGAAAAGAGTGAGTTTTGGGAGCAGCCAGATGGGTTGGGTTACAAGCCTTGCTTAGGTTTTGGCAGGGAGTACAGGAGGCAGAGTGAGGGAATTGTGAAGAACAGGAGGAGGTACCTCATGGTGGTAGTTTCTGGAGGGATGAATCAACAGCGGAATCAGATTGTTGACGCTGTTGTCATTGCTAGGATTCTTGGGTCTGCTTTGGTTGTTCCTATATTGCAAGTCAATGTCATTTGGGAAGATGAAAGTGAATTTGCTGATATATTTGATTTGGAGCACTTCAAGAGTGTTCTTGCCAATGATGTGAGGGTGGTTTCAGCTTTGCCATCAACACATCTAATGACAAGGCCAGTAGAGGGGAGCCCTCCCCTTCATGCCACTCCCAGTTGGATTCGATCACACTATCTCAGAAGATTCAACAGAGAAGGTGTCTTGCTTTTACGTGGACTGGATTCGAGGCTGACAAAGGATCTTCCTCCTGATCTTCAAAAGCTTAGATGCAAGGTTGCTTTTCACGCATTAAGGTTTGCAAAGCCTGTTCAGGAACTTGGTAACAACATTGCCGAGAGAATGAAAAGCAAGGGACCTTACCTTGCTCTTCATCTACGGATGGAAAAGGATGTCTGGGTGAGAACTGGTTGTCTACCTGGTCTGAGTCCTGAGCATGATGAGATTGTAAAAAATGAGAGGATAAATAGGCCTGAACTCTTAACTGCGAAATCAAACATGACATACCATGAAAGGAAGCTGGCTGGTCTCTGCCCCTTAAATGCTGTGGAGGTTACCAGGCTGCTTAAAGCTCTAGGAGCTCCAAAAAGTGCAAGAATTTACTGGGCTGGAGGACAACCGTTAGGTGGGAAAGAGGCATTGCAACCACTAATCAACGAGTTTCAAAATATTTACAGCAAGGAAGATCTTGCTTTACCTGGAGAACTAGAACCATTTGCAAATAAAGCTTCCCTAATGGCTGCCATAGATTACATAGTCTCTGAGAAGAGTGATGTTTTCATGCCATCTCATGGAGGAAATATGGGCCATGCAATTCAGGGTCACAGGGCTTATGCAGGTCACAAGAAATATATAACACCAAACAAAAGACATATGCTGCCCTATTTTCTGAACTCTTCCCTCCCTGAAGAAGAGTTCAACAGCATCATCAAGGAATTGCATCAAGACTCATTAGGTCAGCCAGAACTCAGGACTAGCAAGGCTGCAAGAGATGTCACTAAGTATCCTATTCCTGAGTGCATGTGCAATGACTCATAA 1629 0.4487 MAKSKNNAKKLSYISVPSQIINSISSSSLQSLLESPKKCARHSKVFSFVKWAMIKLGFNLDTPFPPFPCATSVGFSKSMPGVVSQEGGILDGADDTVSEPLITSVQLHAQVPRGVETVEEVEKSEFWEQPDGLGYKPCLGFGREYRRQSEGIVKNRRRYLMVVVSGGMNQQRNQIVDAVVIARILGSALVVPILQVNVIWEDESEFADIFDLEHFKSVLANDVRVVSALPSTHLMTRPVEGSPPLHATPSWIRSHYLRRFNREGVLLLRGLDSRLTKDLPPDLQKLRCKVAFHALRFAKPVQELGNNIAERMKSKGPYLALHLRMEKDVWVRTGCLPGLSPEHDEIVKNERINRPELLTAKSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKSARIYWAGGQPLGGKEALQPLINEFQNIYSKEDLALPGELEPFANKASLMAAIDYIVSEKSDVFMPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPYFLNSSLPEEEFNSIIKELHQDSLGQPELRTSKAARDVTKYPIPECMCNDS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00046 542 PANTHER OS02G0726500 PROTEIN-RELATED 118 540 - -
Vian5g00046 542 Pfam GDP-fucose protein O-fucosyltransferase 159 475 IPR019378 -
Vian5g00046 542 CDD O-FucT_plant 159 480 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00046 Vian-Chr5 719524 722125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00046 10 542 Miscellaneous Gene Families AT3G07900 62.943 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00046 - - vun:114169624 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00046 5 719524 722125 Vian5g00046 5 719524 722125 ECH