Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00040 ATGGCTTCTGTGCAAATCCTGTGTGCATGCACAAGTAGTAGCCAGGTTCAACACCAGAATTCAATCAGATACAGATATGGATACCCCAGAGAGAAGATGAATGAGAGAAGGTGTTCAGTTAGAGTTGAAGGTGGGAATGGAATGGTTGTTCCAAGTTCAGAGGAAGAGAAGAGGAAGCTGAGAGTGTTGGTGGCTGGTGGAGGAATTGGTGGCCTTGTTTTGGCTCTGGCTGCAAAGCACAAAGGGTATGCAGTGAAGGTGTTTGAGAAGGATTTAAGTGCTGTTAGAGGTGAAGGTAGGCACAGAGGCCCAATTCAAATCTTGAGCAGTGCCCTTGCTGTGCTGGAAGCCATCGATCAGAGTGTTGCATGGAAGATAAAGGAGGCTGGCTGTGTCACTGCCAATAGGACTAATGGCTTTGCTGATGGTCTATCTGGAGAGTGGTTCGGTGAGTTTGATCTTTTGACTCCTGCTTCAAGGAAAAGGCTTCCTCTTACCCTAGTCATATGTAGGATGACACTGCAAGATATATTAGTCAATGCAGTTGGTCCAAACATACTAAGAAACAAATCTAAAGTTGTGGATTTTATTCAGGAACCTAGCAAGGTTAGAGTGATCCTTGAAAATGGTGAGCAACATGATGGTGATATCCTAATAGGAGCAGATGGAATATGGTTCGTTCTAAACTCTTTGGGCGCCAAGAAGCAAATTACTCAGGGCATGAACCAGTACTTTGTTGCTTCAGATGTTGGCCATGGAAAGATGCAATGGTATGCTTTCCATGGGGAACCCCCATCAAAAGATCCTTTCCTAGAAGGTAAGAAGAAGAGGCTTTTGGATCTCTTTGGTAATTGGTGCAATGAAGTGATTGCACTAATATCAGAAACACCAGAGAATATGATTCTGCAGAGGGATATATATGACAGAGACATGATCAACACTTGGGGAATTGATAGAGTGACTTTGTTGGGTGATGCAGCTCATCCAATGCAACCAAATCTTGGTCAAGGGGGTTGCATGGCAATAGAGGACTCTTACCAATTGATACTTGAGCTTGACAAGATTGCTAAACATGACCCTGATGAGTCTGAAGTTATCTCAGCCCTTAGAAGATATGAGAAGAAAAGAATTCCAAGGGTTATTGCTCTTTCAAAGAACGTCTTTCCCAGGGACATAAACGAAGATGAGCACGAGGAAGTGGAAGATACAATGAGGTTGGCTTACTTGAATAAGCCAGAGGTGTTGTACAAGCTTTGCAAAAAAATATGGACAAGTGAAAGTGATGATGTTGTTAGGAGTTGTGAAGATGGTTGCGAAGAAGAAAACAAGTTGAGACATGATGAAGAATGA 1350 0.4296 MASVQILCACTSSSQVQHQNSIRYRYGYPREKMNERRCSVRVEGGNGMVVPSSEEEKRKLRVLVAGGGIGGLVLALAAKHKGYAVKVFEKDLSAVRGEGRHRGPIQILSSALAVLEAIDQSVAWKIKEAGCVTANRTNGFADGLSGEWFGEFDLLTPASRKRLPLTLVICRMTLQDILVNAVGPNILRNKSKVVDFIQEPSKVRVILENGEQHDGDILIGADGIWFVLNSLGAKKQITQGMNQYFVASDVGHGKMQWYAFHGEPPSKDPFLEGKKKRLLDLFGNWCNEVIALISETPENMILQRDIYDRDMINTWGIDRVTLLGDAAHPMQPNLGQGGCMAIEDSYQLILELDKIAKHDPDESEVISALRRYEKKRIPRVIALSKNVFPRDINEDEHEEVEDTMRLAYLNKPEVLYKLCKKIWTSESDDVVRSCEDGCEEENKLRHDEE 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00040 449 Gene3D - 61 404 IPR036188 -
Vian5g00040 449 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 317 332 - -
Vian5g00040 449 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 61 83 - -
Vian5g00040 449 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 332 348 - -
Vian5g00040 449 SUPERFAMILY FAD/NAD(P)-binding domain 60 383 IPR036188 -
Vian5g00040 449 PANTHER - 47 225 - -
Vian5g00040 449 Pfam FAD binding domain 311 383 IPR002938 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00040 Vian-Chr5 655917 665194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00040 55 348 Miscellaneous Gene Families AT4G38540 23.684 2.93e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00040 K09838 - gmx:100778602 588.186