Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00034 ATGCCTTCGATCATGTCACCCCAGTGGCAAGACAAGGCAGCTGGTTTCTTTTCTTCCTCCGGAGTCAAGCTTAAAGAAGCCAAGGAATCAGCAGGAACATTTGTTGGTGAGGTCACCAAAGATACAAAAAGCAATGTGACTGAAGTGGCTGGACGAGTGGGGTCAATGGTCAAGAGTCGGTGGGCACTTCTCCAGCAGCCATCCACAAGACATGCTGTGCAGGATCGCTTGATATCAGCAGCTGCTACAACTGGCTCGCTCCTGAGGAGAGGCTTGTCTGGGACAAAGGATAAGGTGGTTGTGGGAAAGTCCAAGGTTGAAGAGGTGGCAAAAATTACAGCACAAAAAAGTAAGACTATCTTGACAGATATTGAAAGATGGCAAAAGGGAGTTGCAAGCACTGATGTATTTGGAGTTCCAATTGAGGTTACTGTGCAGAGGCAAGATTACTGCAAACCTATTCCTCGGATATTGGTCAATTGTGCAGATTATCTTATAGTTTCAGGTTTGAACTCGCCAGATCTTTTTAAATCTGAAGGGAATAAAAAGGTTATTCACCAATTGGTTTCCCTATACAACCAAGATTCTAATGCTTCAATACCAGAAGGCACGAATCCCCTTGATGTAGCAGCTCTTGTGAAATATTACCTTGCTAGCCTTCCTGAGCCACTTACCACATTAGAGCTTTATAATGAGATTAGAGGTGCTCGGTCCAGCATATACTCCATGAGAAACATACTCAAGAGGCTTTCCAGTGTAAACTACATGACCCTAGAGTTTATAACCGCCCTTCTACTCCGAGTTAGCCAGAAGTCACTTCTCAACAAGATGGATGCTCGGAGCTTAGCTATGGAAATGGCACCTGTTATTATGTGGCAAAAGGAAAACAGACCTGAATTTTATCGTCAATATTGGAATCAGATGTCAAGAAGTCCTTCCGAAAAGAGTGTGGATACACCACCTGGTTCATTTGCTGCCTGGGACATGCTTTCCGATGATGGTGAAGCCATAGACGCATCCTCTCCTATTCCTTTGGATGATGGCACGCCAGTAGACTTTGGTGCAATTGAAGTTATTCAGTTGCTCGTGGAGCATCATAATGCAATCTTCACAGATGCAAATGAGACAGTTTGGAAATGA 1140 0.4421 MPSIMSPQWQDKAAGFFSSSGVKLKEAKESAGTFVGEVTKDTKSNVTEVAGRVGSMVKSRWALLQQPSTRHAVQDRLISAAATTGSLLRRGLSGTKDKVVVGKSKVEEVAKITAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQDYCKPIPRILVNCADYLIVSGLNSPDLFKSEGNKKVIHQLVSLYNQDSNASIPEGTNPLDVAALVKYYLASLPEPLTTLELYNEIRGARSSIYSMRNILKRLSSVNYMTLEFITALLLRVSQKSLLNKMDARSLAMEMAPVIMWQKENRPEFYRQYWNQMSRSPSEKSVDTPPGSFAAWDMLSDDGEAIDASSPIPLDDGTPVDFGAIEVIQLLVEHHNAIFTDANETVWK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00034 379 ProSiteProfiles Rho GTPase-activating proteins domain profile. 139 370 IPR000198 GO:0007165
Vian5g00034 379 PANTHER AUXIN-REGULATED PROTEIN-LIKE 1 379 - -
Vian5g00034 379 CDD RhoGAP 155 299 - -
Vian5g00034 379 SMART RhoGAP_3 152 317 IPR000198 GO:0007165
Vian5g00034 379 Gene3D Rho GTPase activation protein 92 377 IPR008936 -
Vian5g00034 379 Pfam RhoGAP domain 155 294 IPR000198 GO:0007165
Vian5g00034 379 SUPERFAMILY GTPase activation domain, GAP 134 298 IPR008936 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00034 - - gmx:100794806 694.501