Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00030 ATGCAAGGTCGAGTCAAAGAAGCAATGGAAATGCTGAAAGGAGTTAATGAAAACGCTGCAAATTTAAATCCACCAGCAGAAGAAAAAAGGGTTTCATTTTGTCAACTCTACTCATCGATAGCAGTGTTGTTAAGAACAAGTTGGGCTCCAAAACGGATGGTGGGAGTTATGGGGTTAGGTCTTGGCATTGGAATGGTGTACTTAGGGATGCCATTAGCAGTGGGAAACTTGAACTACAACATATACCTTGCAGTTGTGTTGAATGCGTTGATGGAAATACCGTCTTGCGTGGTGACCTATTTCTTGGGAAACTGCGGGAGAAAGTTATCGATTCTTGTGTTCTCAGTAGGAAGTGGGATATGTTGCATAGTGTGTGTGGTGATAGGCAGTGAAGGTGTTAAGGTGGGGTTTGCAGTGGCATCGTTTTTCTGTGCATGCACTGCTTTTAACGTGTTTCTGATATTCATGGTGGAGCTGTTTCCGACATGCGTGAGGAACACTGCAGCATCGGTTGCGAGACAGGCTGTGGTGTTTGGGTGCATGTTCAGTCCGTTTCTGATATCTGCTAGGAGAAAGAACAAGGTTTTCTCTTATGGCGTGTTTGGAGTGGTTATAATCTCCTCCACTTTGACGTTGTTGGGTTTGCCAGAGACAAGAGGAATGCCTCTTTCTGACACCATGGATCAACAGCAGAACAAAGAAAGCAACTTCCCACTCTGA 720 0.4472 MQGRVKEAMEMLKGVNENAANLNPPAEEKRVSFCQLYSSIAVLLRTSWAPKRMVGVMGLGLGIGMVYLGMPLAVGNLNYNIYLAVVLNALMEIPSCVVTYFLGNCGRKLSILVFSVGSGICCIVCVVIGSEGVKVGFAVASFFCACTAFNVFLIFMVELFPTCVRNTAASVARQAVVFGCMFSPFLISARRKNKVFSYGVFGVVIISSTLTLLGLPETRGMPLSDTMDQQQNKESNFPL 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00030 239 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 228 - -
Vian5g00030 239 Gene3D MFS general substrate transporter like domains 1 228 IPR036259 -
Vian5g00030 239 SUPERFAMILY MFS general substrate transporter 36 225 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00030 Vian-Chr5 592059 592778 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00030 1 233 Organic Solute Cotransporters AT1G16390 42.149 9.36e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00030 - - vun:114169041 353.214