Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00024 ATGTGCAGCAGCAGCAGCAAGCAGAGAATTGAAATGGAGGATTCTGTTAAAGATGCAACCGACCAACAGAAGAAGATGATTGTGTCATGGGATGAAATGATAGAGAAGGGTTTGGGGAACTTTGGATGGACACAGTTCCTTCAATGCATCCTCGTCTCAGTCGCAATGTTCTTCGATTCACAGCAATTATTCATAGGAGTCTACACTGACGATTACCCGACATGGCACTGCACCAACCACACGACAACATGCACCTCAAATTCCGACATCTGCAAGCTCCAAAAGTCTTCATGGGAATGGGATGGACCCTCTTCCAAGACAATCATTTCACAGTTTGGCCTTCAATGTGCCAGCAGCTTCATCACAGGTTTACCCCAATCCTCCTTCTTCTTCGGTTGCCTTCTCGGTTCCTTTCTTCTTGCCACCATGGCCGACACATCTCTCGGAAGAAAGAACATGATCATTCTCTCTTGTTTATCAATGTCCGTAATTTCAATCGTCATCATCTTCTCCACCAACGTTTGGATATACTCAGCCTTAAAATTTCTCATTGGGTTCTGTCGATCGTCCATCTCAACATGTTGCCTGGTGTTACTGACGGAGAAAGTGAGCACCGAGTGGAGGTTCACGGTGGGGATTATAGAGTTTGTTTTCTTCACATCAGGGTACATGTTCTTGCCAGGTGTGGCTTATGCCAACAGAAATTCTCCATGGAAATATCTTTACGTGTGGATTTCTGTTCCTGCTATTTCATACTCTTTCATTGCTTATCTTTTCGTCACCGAGTCTCCAAGGTGGCTTCTCATGCAAGGTCGAGTCAAAGAAGCAATGGAAATGCTGAAAGGAGTTAATGAAAACGCTGCAAATTTAAATCCACCAGCAAAAGAAAAAAGGGTTTCATTTTGTCAAGTCTACTCATCGATAGCAGTGTTGTTAAGAACAAGTTGGGCTCCAAAACGGATGGTGGGAGTTATGGGGTTAGGTCTTGGCATTGGAATGGTGTACTTTGGGATGCCATTAGCAGTGGGAAACTTGAACTACAACATATACCTTGCAGTTGGGTTGAATGCGTTGATGGAAATACCGTCTTGCGTGGTGACCTATTTCTTGGGAAACTGCGGGAGAAAGTTATCGATTCTTGTGTTCTCAGTAGGAAGTGGGATATGTTGCATAGTGTGTGTGGTGATAGGCAGTGAAGGTGTTAAGGTGGGGTTTGCAGTGGCATCGTTTTTCTGTGCATGCACTGCTTTTAACGTGTTTCTGATATTCATGGTGGAGCTGTTTCCGACATGCGTGAGGAACACTGCAGCATCGGTTGCGAGACAGGCTGTGGTGTTTGGGTGCATGTTCAGTCCGTTTCTGATATCTGCTGGGAGAAAGAACAAGGTTTTCTCTTATGGCGTGTTTGGAGTGGTTATAATCTCCTCCACTTTGACGTTGTTGGGTTTGCCAGAGACAAGAGGAATGCCTCTTTCTGACACCATGGATCAACAGCAGAACAAAGAAGGAAACTTGCCACTCTGA 1524 0.4495 MCSSSSKQRIEMEDSVKDATDQQKKMIVSWDEMIEKGLGNFGWTQFLQCILVSVAMFFDSQQLFIGVYTDDYPTWHCTNHTTTCTSNSDICKLQKSSWEWDGPSSKTIISQFGLQCASSFITGLPQSSFFFGCLLGSFLLATMADTSLGRKNMIILSCLSMSVISIVIIFSTNVWIYSALKFLIGFCRSSISTCCLVLLTEKVSTEWRFTVGIIEFVFFTSGYMFLPGVAYANRNSPWKYLYVWISVPAISYSFIAYLFVTESPRWLLMQGRVKEAMEMLKGVNENAANLNPPAKEKRVSFCQVYSSIAVLLRTSWAPKRMVGVMGLGLGIGMVYFGMPLAVGNLNYNIYLAVGLNALMEIPSCVVTYFLGNCGRKLSILVFSVGSGICCIVCVVIGSEGVKVGFAVASFFCACTAFNVFLIFMVELFPTCVRNTAASVARQAVVFGCMFSPFLISAGRKNKVFSYGVFGVVIISSTLTLLGLPETRGMPLSDTMDQQQNKEGNLPL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00024 507 Gene3D MFS general substrate transporter like domains 41 501 IPR036259 -
Vian5g00024 507 SUPERFAMILY MFS general substrate transporter 107 493 IPR036259 -
Vian5g00024 507 ProSiteProfiles Major facilitator superfamily (MFS) profile. 48 487 IPR020846 GO:0022857
Vian5g00024 507 Pfam Sugar (and other) transporter 93 492 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vian5g00024 507 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 42 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00024 Vian-Chr5 318089 319612 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00024 20 502 Organic Solute Cotransporters AT1G79360 44.664 1.41e-157 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00024 - - vun:114169041 811.601