Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00017 ATGTCGCTCAATATGAAAACCCTAACCCAAGCATTGGCCAAAACCGCCGCGGTCATAGAGAAGAGAGTGCAGACAACGGTGCAGGAGGTCACGGGCCCCAAGGCACTTCAGGACTACGAGCTCCTTGACCAGATCGGCTCGGCGGGGCCCGGGCTCGTCTGGAGGCTCTACTCGGCCCGGGCCCGTGATCCAGCGCGCCAGCACCAATACCCTGTCGTCTGTGTCTGGGTGTTGGACAAGCGCTCTCTTTCCGAGGCCCGAATGCGTGCGGGCCTTACCAAGGCCGCCGAGGATTCCTTTCTCGATTTGATTCGGACCGATGCCGCCAAGCTCGTTCGCCTCAGGCATCCTGGGGTCGTTCACGTCGTCCAGGCCCTCGACGAGAGCAAGAACGCCATGGCTATGGTCACCGAACCCTTGTTTGCTTCCGCTGCCAATACTCTTGCCATTGTTGATAACATTCCTGTTCTTCCTAAAGATCTCAGGGGAATGGAAATGGGACTGTTGGAGGTGAAGCATGGTTTACTTCAGATTGCAGAATCCCTGGACTTTCTCCACAACCAAGCTCATCTTATTCATCGAGCTATAGCACCCGAGAACATTCTTATCACCTTGAGTGGAGCCTGGAAACTTGCTGGATTTGGTTTTGCAGTTTCTGCCACTCAGACTTCTGGTGACTCATCTAATCTGCAACCCTTCCATTATGCTGAATATGATGTCGAGGACTCTATTTTGCCTCTTCAGCCATCACTTAATTACACTGCTCCTGAGCTGGTGAGGAGCACTGGGTCTTCAGCTGGGAGTTCATCTGATATTTTCAGTTTGGGATGCCTTGCCTATCATTTAATCACCCGCAAGTCTTTGTTTGACTGCCACAACAATGTGAAGATGTACACAAATACCTTGACTTACTTATCCAGTGATGCATTCTCATCTATCCCATCAGAACTGGTTCATGACCTGCAAAGGATGCTTTCTCCGAATGAGTCTTCCAGGCCAACAGCAATGGATTTTACAGGATCACCATTTTTTCGGCATGACACTAGGTTGCGTGCCCTACGGTTCCTTGACCACATGCTTGAAAGAGATAACATGCAGAAGACAGAGTTCTTAAAAGCATTGTCAGATATGTGGAAAGATTTTGATTCCCGTGTCTTGCGATACAAGGTCCTTCCACCACTTTGTGCAGAGCTTAGGAATGTGGTGATACAGCCAATGATTCTACCAATGGTTCTTACTATTGCAGAGTCTCAGGACAAGAACGATTTTGAGCAATATACACTTCCAGCTCTTGTCCCCGCGTTGAGTACTGCTTCTGGTGAGACACTGTTACTGCTTGTGAAGCATGCTGATCTTATAATAAACAAGACTAGTCAAGAGCATTTAGTTTCTCATGTTCTTCCAATGATTGTTCGGGCCTATGATGATAATGATGCTCGTTTGCAAGAAGAGGTCCTGAAAAAGTCTACATCCCTTTCCAAACAACTAGATCCCCAGCTTGTCAAGCAAGTGGTTTTGCCCCGCGTTCATGGATTAGCACTTAAAACAACGGTTGCAGCGGTTAGAGTCAACGCATTGTTGTGCCTAGGAGACATGGTTAACCGACTTGATAAACATTCTGTCTTGGACATCTTGCAAACAATTCAACGCTGTACTGCTGTTGACCGTTCCCCTCCAACCCTTATGTGTACCCTGGGGGTTGCAAATTCTATTTTCAAGCAGTACGGAGTAGAATTTGTTGCCGAGCATGTTCTTCCATTGCTTATGCCCCTCCTGTCTGCTCAACAATTGAACGTCCAACAGTTTGCCAAATACATGCTCTTTGTCAAGGATATGCTCCACAAAATAGAAGAGAAGCGAGGAGTGGCTGTGACTGATTCTGGAATGCCAGAGGTAAAACGGTCTCCCGTGGTTAATGGTGTTCAATCCGAAGCCCTGCGGACAAGCAGCAGTTCTGTGCCTGCTTCAGCTAAAAGCAGCTCCTCTTGGGATGAAGATTGGGGTCCCAAAACAGAGTACAGTGCCTCATCTACTGAGAATTCTATTGATGCAGCCCGTCCATCTCTGGCAGGCAGCCATGTGGGTCAAGTAACATCTTTACAAAAGCATTTGTCCTTAACTGCTTTATCTGCTCAGCAAACAACCAAGTCATGCCCGTCAGTAGATGTAGAATGGCCACCTCGGGCATCTCCTGGTGTTACCCCACAATTTAGTGATACTGAGAAGCACACAATAGGAGCAGGAACTTCATCCACGTCTAATCTTGAATCTGATGATCCTTTTGCTGATTGGCCTCCACGTCCTAATGGCTCAGTATCAAGTGGATCTGGAATTCCCAACAATGGTAGTTCAGGAATGCCACTGAACATTGGGTTTAATTCGATGACAAATACTTCAAGCAATATTGGTTCCCAAACTAGCATGAGTTGGTCTGCTAGTCCCCAAATTTCTGCAGATCCCATTAGTTTGAACTCAAGGACTAGTTCCACAGTGGGTAGCCTGAATAGTGGCCTTGGGCATCAGAATTCTCTTGGGTTCCTAAAGCAAAGTCAAGCTTTTCCAGCATCCAATGTTTCATACAATAATGTTCAGTCACCAGCAACAGATCTAGGATCAATATTTTCTTCCAACAAGAATGAACACATTGCGCCTAAACTTGCACCTCCCCCATCATCTGCAGTGGGTAGAGGACGAGGAAGAGGGAGGGGAGCTGCGTCAACCACTAGGTCCTCTCACACTAAGTCACACGCTGAGCAGCCACCCCTTTTGGATTTGTTAGGGTAA 2784 0.4759 MSLNMKTLTQALAKTAAVIEKRVQTTVQEVTGPKALQDYELLDQIGSAGPGLVWRLYSARARDPARQHQYPVVCVWVLDKRSLSEARMRAGLTKAAEDSFLDLIRTDAAKLVRLRHPGVVHVVQALDESKNAMAMVTEPLFASAANTLAIVDNIPVLPKDLRGMEMGLLEVKHGLLQIAESLDFLHNQAHLIHRAIAPENILITLSGAWKLAGFGFAVSATQTSGDSSNLQPFHYAEYDVEDSILPLQPSLNYTAPELVRSTGSSAGSSSDIFSLGCLAYHLITRKSLFDCHNNVKMYTNTLTYLSSDAFSSIPSELVHDLQRMLSPNESSRPTAMDFTGSPFFRHDTRLRALRFLDHMLERDNMQKTEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFEQYTLPALVPALSTASGETLLLLVKHADLIINKTSQEHLVSHVLPMIVRAYDDNDARLQEEVLKKSTSLSKQLDPQLVKQVVLPRVHGLALKTTVAAVRVNALLCLGDMVNRLDKHSVLDILQTIQRCTAVDRSPPTLMCTLGVANSIFKQYGVEFVAEHVLPLLMPLLSAQQLNVQQFAKYMLFVKDMLHKIEEKRGVAVTDSGMPEVKRSPVVNGVQSEALRTSSSSVPASAKSSSSWDEDWGPKTEYSASSTENSIDAARPSLAGSHVGQVTSLQKHLSLTALSAQQTTKSCPSVDVEWPPRASPGVTPQFSDTEKHTIGAGTSSTSNLESDDPFADWPPRPNGSVSSGSGIPNNGSSGMPLNIGFNSMTNTSSNIGSQTSMSWSASPQISADPISLNSRTSSTVGSLNSGLGHQNSLGFLKQSQAFPASNVSYNNVQSPATDLGSIFSSNKNEHIAPKLAPPPSSAVGRGRGRGRGAASTTRSSHTKSHAEQPPLLDLLG 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00017 927 SUPERFAMILY Protein kinase-like (PK-like) 34 347 IPR011009 -
Vian5g00017 927 Gene3D Transferase(Phosphotransferase) domain 1 161 348 - -
Vian5g00017 927 Pfam Protein kinase domain 104 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian5g00017 927 SUPERFAMILY ARM repeat 347 608 IPR016024 -
Vian5g00017 927 MobiDBLite consensus disorder prediction 880 927 - -
Vian5g00017 927 Gene3D Phosphorylase Kinase; domain 1 35 138 - -
Vian5g00017 927 MobiDBLite consensus disorder prediction 769 834 - -
Vian5g00017 927 CDD PK_SCY1_like 45 346 - -
Vian5g00017 927 MobiDBLite consensus disorder prediction 733 758 - -
Vian5g00017 927 ProSiteProfiles Protein kinase domain profile. 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian5g00017 927 MobiDBLite consensus disorder prediction 641 679 - -
Vian5g00017 927 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 37 918 - -
Vian5g00017 927 Gene3D - 349 621 IPR011989 -
Vian5g00017 927 MobiDBLite consensus disorder prediction 715 834 - -
Vian5g00017 927 MobiDBLite consensus disorder prediction 633 679 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00017 104 349 CBL-interacting serine-threonine protein kinases AT2G26980 22.800 3.14e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Vian5g00017 Pkinase 7.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00017 K17541 - gmx:100796211 1573.91