Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00016 ATGAGGATGGGGATGGAGACGAGAATGATGATGGCCATGGTTGTTCTCATGTTCCTTCTGCAGATGGTGGCATCATCGGATCTCCGACCTGGGTTTTATTCAGAAACATGTCCAAACACAGAAGTTATAGTACGAGATGTGATGAAAAGGGCCCTTGCGGTGGAACCCAGAAGTGTTGCCTCCGTTATGCGGTTCCAGTTCCATGACTGTTTTGTGAATGGGTGTGACGCCTCCATGCTGCTTGATGATACACCCACCATGGTTGGGGAGAAGCTTGCTCTTTCCAACATAAACTCCCTGAGATCATTTGAAGTTGTCGATCAAGTTAAGGAAGCCCTAGAGAACGCATGCCCTGGTGTTGTCTCCTGTGCTGACATCATTATCATGGCATCCCGAGATGCTGTCGCTCTGACAGGTGGACCCGATTGGGAGGTGAGGTTGGGAAGATTGGACAGCTTGAGTGCTAGTCAAGAAGACTCAAACGAAATAATGCCGAGTCCAAGAGCCAATGCGTCTGCTCTTATCGATCTGTTTCAGAAGTACAATCTGACTGTGAAAGACCTTGTTGCACTCTCAGGGTCTCACTCCATTGGTCAAGGTCGGTGCTTCTCCATCATGTTTAGGCTGTACAATCAATCTGGAACTGGAAGGCCTGACCCTGCCATTGAGGCTGGCTATAGGGAAGAGCTTGAGAGACTTTGTCCGCTGGATGTTGATCAGAATGTGACAGGGAACCTTGACTTTACGCCTCTTGTGTTTGATAATCAGTATTTCAAGGACTTGGTTGCTGGGAGAGGGTTTCTCAACTCTGATCAAACACTTTTCACATTCCCACAGACAAGGGAGTTTGTCAGATTCTTCAGTACAAATCAAGATCAATTTTTCAAAGCCTTTGTGGAAGGAATGCTTAAAATGGGTGACTTGCAGTCTGGTCGACCTGGGGAAGTTAGGACCAATTGCAGAGTCGTCAATGCTCGCCCTGCTCATTTGCTCTTTGAGTCTCAACACAACCTCCTCAGTAATAATAAATCAATTTACGATATGTAA 1047 0.467 MRMGMETRMMMAMVVLMFLLQMVASSDLRPGFYSETCPNTEVIVRDVMKRALAVEPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMVGEKLALSNINSLRSFEVVDQVKEALENACPGVVSCADIIIMASRDAVALTGGPDWEVRLGRLDSLSASQEDSNEIMPSPRANASALIDLFQKYNLTVKDLVALSGSHSIGQGRCFSIMFRLYNQSGTGRPDPAIEAGYREELERLCPLDVDQNVTGNLDFTPLVFDNQYFKDLVAGRGFLNSDQTLFTFPQTREFVRFFSTNQDQFFKAFVEGMLKMGDLQSGRPGEVRTNCRVVNARPAHLLFESQHNLLSNNKSIYDM 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00016 348 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 SUPERFAMILY Heme-dependent peroxidases 27 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 Gene3D - 31 324 - -
Vian5g00016 348 FunFam Peroxidase 31 173 - -
Vian5g00016 348 Gene3D Peroxidase, domain 2 165 305 - -
Vian5g00016 348 FunFam Peroxidase 165 305 - -
Vian5g00016 348 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 CDD secretory_peroxidase 28 323 IPR033905 GO:0004601|GO:0042744
Vian5g00016 348 Pfam Peroxidase 44 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 PANTHER PEROXIDASE 72-RELATED 20 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 ProSiteProfiles Plant heme peroxidase family profile. 27 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian5g00016 348 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00016 Vian-Chr5 226216 227720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00016 13 334 Peroxidase AT2G22420 73.292 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00016 K00430 - gmx:100796737 567.77