Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02593 ATGTGTCGCAGAGGCAGAGCATTAGTCACCATGGCGAGCCACGAAGACGACCTCGATCTCCTTCTCTCTCTTCAAGACAGAGTTCCCGACACTCCTCCTGCTTCTCCCACACCAGGTATCATCACTATCTCAACCAATTTTTTTCTTTTCTTTATGCATTTTTCGGACAAACCTGACATGTCCGTATTCAAAAACGCCGTTCAAGATTGTCTTCCCTATGACCCCCCAAAAGCGCTCAAACCAACTAACAAACCTGTTACTAACGATTCCCAGCTTGAAAAGTTTTCAGGCCTTCGCATTAAGAACCAATTGTTAACTCATGCGGAGTTGAAGGAACAATTTTCAGACATTCGCTTTGTTCGGTTATCTGTTATCAAGAATTCGTTGATTGGAGATAGTTTCTCTGGAAATTGGGCCACTGTTGGTGTTTTGACTGAGAAGGGGAGTCAGAAGACAAGTTCAACGGGGAAAAGCTTTTCTATATGGAAAATTGGGTGTCTGGATGAATGTACCATTTCTCTTTTCTTGTTCGGAGATGCTTATCAGAGGAACATGCAAGAGCAAGCGGGAACGGTCTTTGCACTGTTTAACTGTGCTGTTCGCAAGGATAGTGCGGGCAATGGTTTTTCTTTGAGTATATACTCCCCTAGACAAATTGTGAAGATGGGCACCTCTGTTGATTATGGGGTTTGCAAAGGGAAGCGAACAGATGGGATTGCTTGTACGCTGGTCATAAATAAACGTCATGGGACATATTGCAAATATCATAAATCAAAAGCATCAGAGAAATATTCCACGATGCGAAGTGAACTCATGGGAGGAACAGCGTTTAGGCCTAAGTCTAGGGATTACCTCAAATCAGAAGGAATTTACTTAGTTGACCCCCTTGCTGACAAAACAAACTCGAAGAATTCTCGGCCAGTGAAACTATTGTCCGCGGATGGTCTCAGAAAGGCATTGAGCAATGCAGGAAAAGTAACAACAACTCCTCATTCTCAAGGGATCAGGTTTCTTTCTCAGCTTGCAGCCATGACGAATCCGAAAGCGAAGGATAAAGGATCAAAGATTCCACATGAACAAAAATGTACGGAGAAGAGGAAATCATCCTTTCCGAATGTGGGATCTTCTTCAGTCATAGGAAACCGACAGTTGGATGGAAAAAGAATAAAATCAGATGACCAGGTTTTGGCTGCTAAAACTTCAAAGCCTACTGAAAAGATGATTGAATTAGACTTTGTAAGCTCGGACGAAGACTTCTAA 1260 0.4278 MCRRGRALVTMASHEDDLDLLLSLQDRVPDTPPASPTPGIITISTNFFLFFMHFSDKPDMSVFKNAVQDCLPYDPPKALKPTNKPVTNDSQLEKFSGLRIKNQLLTHAELKEQFSDIRFVRLSVIKNSLIGDSFSGNWATVGVLTEKGSQKTSSTGKSFSIWKIGCLDECTISLFLFGDAYQRNMQEQAGTVFALFNCAVRKDSAGNGFSLSIYSPRQIVKMGTSVDYGVCKGKRTDGIACTLVINKRHGTYCKYHKSKASEKYSTMRSELMGGTAFRPKSRDYLKSEGIYLVDPLADKTNSKNSRPVKLLSADGLRKALSNAGKVTTTPHSQGIRFLSQLAAMTNPKAKDKGSKIPHEQKCTEKRKSSFPNVGSSSVIGNRQLDGKRIKSDDQVLAAKTSKPTEKMIELDFVSSDEDF 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02593 419 PANTHER PROTEIN MCM10 HOMOLOG 57 390 IPR040184 GO:0003690|GO:0003697|GO:0006270
Vian4g02593 419 Pfam Primase zinc finger 223 268 IPR015408 GO:0005634|GO:0006260
Vian4g02593 419 MobiDBLite consensus disorder prediction 351 366 - -
Vian4g02593 419 MobiDBLite consensus disorder prediction 367 382 - -
Vian4g02593 419 Gene3D - 83 257 IPR012340 -
Vian4g02593 419 MobiDBLite consensus disorder prediction 347 386 - -
Vian4g02593 419 FunFam DNA replication licensing factor mcm10 84 258 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02593 27 418 Core DNA Replication Machinery Family AT2G20980 50.868 1.93e-124 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02593 K10736 - gmx:100527758 593.193