Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02588 ATGGGTAAGATTCCTTGGAAGTTACTTTCCTGCACATTCTTCGTCATTCTCTTCAGTTTACTGTTTAAAGTAACGGCAGACTATCATCCTTCCAAAACATTCATCTTCAGAATCGATTCCGAATCCAAACCCTCCGTTTTCCCCACGCACTACCACTGGTACACCTCCCACTTTGTCCACCCAACTCGCCTTCTCCATCTCTACGACACCGTTTTCCACGGCTTCTCCGCTCTCCTAACCCCCCAACAAGTTTCTTCTCTTTCCCAACACCCCTCCGTGCTAGCTGTCTTCGAGGACCGCCGCCGCCACCTTCACACCACGCGCTCTCCTCAGTTCGTTGGCCTCAGAAACCACCGCGGTCTGTGGTCCCAAACTGACTACGGATCCGACGTCATCATCGGAGTCTTCGACACCGGAATCTGGCCCGAACGCCGGAGCTTCAGCGATTCCAACCTCGGCCCAATTCCTGACCGCTGGAAGGGGGGTTGCGACACTGGGTCCTACGGTGCAGTTTCCAGAGGTGTGTTTGTGTCATCCTCGGGTGGAAATGACGGGCCCAGTGGAATGTCGGTGACCAACCTTGCACCCTGGTTGACCACTGTCGCAGCAGGTACCATTGATCGCGATTTTCCGGCGGAGGTTATACTGGGAAACGGACGAAGACTCTCCGGCGTGTCTCTCTACTCCGGAGTTCCGTTGAAGGGGAGAATGTTTCCCTTAATATATCCCGGAAAATCAGGGGTTCTTACGGATTCACTATGCATGGAAAACTCGTTAGACCCTGACCTTGTGAAAGGGAAGATAGTGGTTTGCGACAGAGGAAGTAATCCCAGAGTTGCGAAGGGATTGGAGGTGAAGAAAGCAGGAGGAGTAGGAATGATTCTGGCTAATGGAATATCTAACGGTGAAGGACTTGTTGGAGACGCTCATCTTCTTCCCGCGTGTGCACTTGGTGCTAACTTGGGAGATGAAGTTAAAGCCTACATTTCATCCTCTGAGAACCCAAGGGCCACTATCGATTTCAAAGGAACTGTGGTGGGAATCAAACCGGCACCCGTAGTGGCGTCGTTTTCAGCGAGAGGACCCAACGCGTTGAATTTGGAAATACTCAAACCTGACTTGGCGGCACCCGGGGTGAACATTCTGGCGGCGTGGACCAATGCGGTTGGGCCGTCAGGGCTGGAGTCAGACACGAGAAGAAGCGAGTTCAACATTTTGTCGGGCACATCGATGGCGTGTCCTCATGTGAGTGGGGCAGCGGCGTTGTTGAAATCCGCGCACCCTGATTGGAGCCCTGCAGCCATAAGGTCTGCAATGATGACAACCGCTACGGTTCTTGACAACACCAACCGTCAAATGGTTGATCAAGCCACTGGGAATGGCTCCACGCCCTACGATTTCGGCGCTGGACATCTCAACCTCGCTCACGCCATCGACCCTGGGTTGATTTTCGACATTACCAACGATGATTACGTCATGTTTTTGTGTGCCATTGGCTACAGGCCCAGGGTGATTCAGGTGATTACTCGATCGCCGCCTAAATGTCCACGGAGGAGGCCGTCGCCGGAGAATCTGAACTATCCGTCCTTTGTGGCGGTCCTGCCAGCGTATTCATCCTCCAGAGGGTTATCGTTGCTGAGAAAGACGTTCTTCAGGACGGTGACGAACGTGGGTGAGCCAAATTCGGTGTATTGGGTGAGGGTAGAGATGCAGGCGGAGGGAGTGACGGTGACGGTGAGGCCGTCGAGGCTAGTGTTTTCGGAGGCGGTTAAGAAGCGGAGTTTCGTAGTGACGGTGACGGGAGATGCAGGGAATCTGGTGCTGGGCGAGGCCGGAGCGGTCTTCGGGTCGCTTTCGTGGACCGATGGGAAGCACGTTGTTCGGAGCCCCATGGTTGTCACTCAAGCTCAACCGTTTTAA 1920 0.5391 MGKIPWKLLSCTFFVILFSLLFKVTADYHPSKTFIFRIDSESKPSVFPTHYHWYTSHFVHPTRLLHLYDTVFHGFSALLTPQQVSSLSQHPSVLAVFEDRRRHLHTTRSPQFVGLRNHRGLWSQTDYGSDVIIGVFDTGIWPERRSFSDSNLGPIPDRWKGGCDTGSYGAVSRGVFVSSSGGNDGPSGMSVTNLAPWLTTVAAGTIDRDFPAEVILGNGRRLSGVSLYSGVPLKGRMFPLIYPGKSGVLTDSLCMENSLDPDLVKGKIVVCDRGSNPRVAKGLEVKKAGGVGMILANGISNGEGLVGDAHLLPACALGANLGDEVKAYISSSENPRATIDFKGTVVGIKPAPVVASFSARGPNALNLEILKPDLAAPGVNILAAWTNAVGPSGLESDTRRSEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTATVLDNTNRQMVDQATGNGSTPYDFGAGHLNLAHAIDPGLIFDITNDDYVMFLCAIGYRPRVIQVITRSPPKCPRRRPSPENLNYPSFVAVLPAYSSSRGLSLLRKTFFRTVTNVGEPNSVYWVRVEMQAEGVTVTVRPSRLVFSEAVKKRSFVVTVTGDAGNLVLGEAGAVFGSLSWTDGKHVVRSPMVVTQAQPF 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02588 639 Pfam Peptidase inhibitor I9 47 105 IPR010259 -
Vian4g02588 639 Gene3D Peptidase S8/S53 domain 106 166 IPR036852 GO:0004252|GO:0006508
Vian4g02588 639 SUPERFAMILY Subtilisin-like 17 520 IPR036852 GO:0004252|GO:0006508
Vian4g02588 639 Pfam Subtilase family 170 461 IPR000209 GO:0006508|GO:0008236
Vian4g02588 639 Pfam PA domain 251 323 IPR003137 -
Vian4g02588 639 ProSitePatterns Serine proteases, subtilase family, serine active site. 408 418 IPR023828 -
Vian4g02588 639 ProSiteProfiles Serine proteases, subtilase domain profile. 101 478 - -
Vian4g02588 639 Pfam Fibronectin type-III domain 524 633 IPR041469 -
Vian4g02588 639 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 165 633 IPR045051 -
Vian4g02588 639 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 105 IPR037045 -
Vian4g02588 639 Gene3D - 207 346 - -
Vian4g02588 639 Gene3D - 495 636 - -
Vian4g02588 639 SUPERFAMILY PA domain 264 336 IPR046450 -
Vian4g02588 639 FunFam subtilisin-like protease SBT1.5 207 346 - -
Vian4g02588 639 PRINTS Subtilisin serine protease family (S8) signature 407 423 IPR015500 -
Vian4g02588 639 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Vian4g02588 639 Gene3D Peptidase S8/S53 domain 167 491 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02588 Vian-Chr4 42297159 42299477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02588 166 635 Subtilisin-like Serine Gene Family AT4G34980 71.398 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02588 - - vum:124838492 915.22