Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02521 ATGAAAAGGCAGAAGAAAGTGTTTGTGTTTAAATATCAATATCCTTCGTCTAGTTTCTTCTTCATATCGTGTTCTTCTGTTTTTCTTCTTATCATGGCCGCGTCTAATCTCTCCACCCTCTGCTCCTCTTCACACTCCAAACCTTCTTCTTTCCCTTTGTTCAACACACAAAGCTTCAGCGTCAACAGTAACACCGTTTTTCTCAACAACACAAACTCCTTTCAAACCCTTCTCTCTCATTCCACCCACAATCCCCGCTACACTCTGCCTCTCCCATGCACCAAAACCACAAACACTTTCGCCTCTGTCAATGATGACGAAAAGCCTCGCGAAGAGTGCGGCGTTGTGGGCATCTACGGCGACCCAGAAGCCTCCCGTCTCTGCTCCCTCGCCCTCCACGCCCTCCAGCACCGTGGTCAGGAAGGCGCCGGCATCGTCGCCGTCCACGACAACCTCTTCCACTCAGTCAACGGTGTTGGCCTCGTTTCTGACGTCTTTAACGAGGCTAAGCTCTCTGAGCTGCCCGGCTCCTGCGCCATTGGCCACGTCCGCTACTCCACCGCTGGCCACTCCAAGCTCGTGAACGTCCAACCCTTCGTCGCCGGCTACCGTTTCGGCTCCGTCGCCGTCGCGCACAATGGAAACTTCGTGAACTACCGCTCTCTGCGCGCCAAACTGGAAGACAACGGGTCCATCTTCAACACGACCTCCGACACCGAGGTCGTGCTCCACCTGATCGCCACCTCCAAGCACAGACCTTTCCTACTCAGAGTCGTGGATGCCTGCGAGAATCTGAAGGGGGCGTACTCCCTGGTGTTCCTCACGGAGGACAAGCTGGTGGCCGTGAGGGACCCCTTCGGGTTCCGACCTTTGGTGATGGGAAGGAGAAAGAACGGCGCTGTGGTTTTCGCCTCGGAGACATGCGCGCTGGATTTGATCGATGCGACGTATGAGAGAGAGGTGAACCCGGGTGAGGTTGTGGTGGTGGACCACACGGGAATCCAATCCCTCTGCCTCGTGACTCATCAGGAGCCAAAGCAATGCATCTTCGAGCACATATACTTCGCACTTCCCAACTCTGTTGTCTTCGGGAGGTCTGTGTACGAGTCCAGGAGGAAATTCGGGGAAATACTGGCCACTGAGAGCCCCGTTGAGTGCGACGTTGTGATTGCGGTTCCCGATTCTGGGGTGGTGGCTGCGCTTGGCTACGCTGCAAAAGCTGGGGTTCCCTTTCAGCAGGGGTTGATAAGGTCGCACTACGTGGGGAGGACTTTCATCGAGCCCTCGCAGAAAATAAGAGATTTTGGAGTGAAGCTGAAGCTGTCTCCGGTGCGTGGCGTGCTTGAAGGGAAGAGGGTTGTGGTGGTGGATGACTCCATTGTGAGGGGCACCACATCTTCCAAGATTGTGAGGCTGATAAAGGAGGCGGGTGCTAAGGAGGTCCACATGAGGATTGCGTGTCCACCCATTGTTGCGTCATGTTACTACGGTGTGGACACCCCCAGTAAGGAAGAATTGATTTCCAACAGGATGAATGTGGAGGAAATAAGGAAGTTCATTGGCTCTGATTCCCTCGCTTTTCTTCCCTTGGACACGTTGAAGAGTTTGTTGGAGGATGATGCCCCTAACTACTGCTATGCTTGCTTCTCCGGAAAATACCCTGTTCAGCCGGACGAACTTAAACCCAACAGCCTCAATAAGTTAGATTGGGAAGATGCTTTCAATGGCAGTTTGAAACCTATTGAGGACGAGGTTTGGGCTAGAAACCAGGAGGCTGGGAATAACATTGTTAGTGTCTGA 1800 0.5344 MKRQKKVFVFKYQYPSSSFFFISCSSVFLLIMAASNLSTLCSSSHSKPSSFPLFNTQSFSVNSNTVFLNNTNSFQTLLSHSTHNPRYTLPLPCTKTTNTFASVNDDEKPREECGVVGIYGDPEASRLCSLALHALQHRGQEGAGIVAVHDNLFHSVNGVGLVSDVFNEAKLSELPGSCAIGHVRYSTAGHSKLVNVQPFVAGYRFGSVAVAHNGNFVNYRSLRAKLEDNGSIFNTTSDTEVVLHLIATSKHRPFLLRVVDACENLKGAYSLVFLTEDKLVAVRDPFGFRPLVMGRRKNGAVVFASETCALDLIDATYEREVNPGEVVVVDHTGIQSLCLVTHQEPKQCIFEHIYFALPNSVVFGRSVYESRRKFGEILATESPVECDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRGVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHMRIACPPIVASCYYGVDTPSKEELISNRMNVEEIRKFIGSDSLAFLPLDTLKSLLEDDAPNYCYACFSGKYPVQPDELKPNSLNKLDWEDAFNGSLKPIEDEVWARNQEAGNNIVSV 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02521 599 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 113 336 IPR029055 -
Vian4g02521 599 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 113 332 IPR017932 -
Vian4g02521 599 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Vian4g02521 599 CDD GPATase_N 113 363 IPR035584 -
Vian4g02521 599 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 111 560 - -
Vian4g02521 599 Hamap Amidophosphoribosyltransferase [purF]. 112 553 IPR005854 GO:0004044|GO:0009113
Vian4g02521 599 SUPERFAMILY PRTase-like 348 557 IPR029057 -
Vian4g02521 599 Gene3D - 372 536 IPR029057 -
Vian4g02521 599 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 113 554 IPR029055 -
Vian4g02521 599 Pfam Glutamine amidotransferase domain 196 310 IPR017932 -
Vian4g02521 599 Pfam Phosphoribosyl transferase domain 371 483 IPR000836 -
Vian4g02521 599 CDD PRTases_typeI 375 486 IPR000836 -
Vian4g02521 599 NCBIfam amidophosphoribosyltransferase 113 554 IPR005854 GO:0004044|GO:0009113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02521 Vian-Chr4 41740279 41742078 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02521 104 588 PRT Gene Family AT2G16570 79.012 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02521 K00764 - gmx:548065 867.84