Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02518 ATGGGTTTTCGCTTACCAGGTATAAGACGATCATCATTTAGTGGAAGCCAAACATTCTCTTGCAAGGATGCAGAAGTCCCAAAAGGGTATCTTGCTGTGTATGTTGGAGAGAAAATGAAGAGGTTCTTGATACCAGTGTTGTTCTTGAACGAGCCTTTATTTCAAGAATTGCTCAGACAAGCTGAAGAGAAGTTTGGTTTTTGCCATCCCATGGGTGGTCTCACCATTCCCTGCGAGGAGGCTGTGTTCTTAAGCATAGCCTCTCGTTTGAACCAGCAATAA 282 0.4362 MGFRLPGIRRSSFSGSQTFSCKDAEVPKGYLAVYVGEKMKRFLIPVLFLNEPLFQELLRQAEEKFGFCHPMGGLTIPCEEAVFLSIASRLNQQ 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02518 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 20 90 IPR003676 GO:0009733
Vian4g02518 93 Pfam Auxin responsive protein 14 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02518 Vian-Chr4 41703705 41703986 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02518 25 83 Calmodulin-binding Proteins AT3G43120 59.322 1.09e-18 73.9