Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02516 ATGGGTTTCGGCTTCCGTGGGTTTCAAAGGCGTGTGAACATCCCAAAGGGCAGTGTAGCAGTGTATGTGGGAGAAAACCAGAAGAAGCGTTTTGTGGTTCCCATATCATACTTGAACCAACCTTCTTTCCAAGAGTTGCTGAGTCAAGCTGAACAAGAATTTGGATTTGATCATCCAATGGGTGGCCTCACACTTCCTTGCAGAGAAGATGTCTTCCTTCAAGTCACTTCTCGCTTGCACAGGCGATAG 249 0.4699 MGFGFRGFQRRVNIPKGSVAVYVGENQKKRFVVPISYLNQPSFQELLSQAEQEFGFDHPMGGLTLPCREDVFLQVTSRLHRR 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02516 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 79 IPR003676 GO:0009733
Vian4g02516 82 Pfam Auxin responsive protein 13 78 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02516 Vian-Chr4 41684097 41684345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02516 13 72 Calmodulin-binding Proteins AT5G20810 50.000 1.37e-14 63.5