Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02511 ATGGTGCTCGTTGTTCCTACGCTGAAGTGGATGGTCTTTTTTGCTCTCTTCATTTTTTCAGATTGCTTCGATCCGTTGGATTCAACTGGGAACATTTCCGTAACTTTTGACATTTACCAACGTACAGATGATGGATATCTGGCAAGGGTGACGCTTCAGAACTACCATCAGTATAGGCATGTGGAGAAACCAGGGTGGAAGCTAGGGTGGAAATGGGCTAAGAATGAAGTGATATGGTCAATGAGTGGTGCCATAGCAACTGACAGAGGGAATTGCTCGTCTTACAGCGGCTCTCAGATGCCGCATTCCTGCAAGAATGATCCCATCATAGTTGATCTCTCTCCGGAGGTCTCGAAAAACAGGTCAGAGCATTGTTGCCGTGGTGGCCTCCTCTCTGCCTGGTCTATTGATCCTTTCAATGCATTCTCTTCATTTGAACTTGAAGTGCGCAACGTGGGAGATAACCCACTTGGACAAGCACCTAACAATCTTACATTGATGGCCCCAGGTCCTGGTTACACTTGTAGCCCCCTTCTTGACACTGATCCCTCAGTGTCCTCAGATTTTGGGGGACTAAGACAAGTTCCTGTTCTCAGAACTTGGAAGTCAACATGTGCATACTCCAGTTTCTTAGCAAACACATTACCGGTATGCTGTGTTTCCCTCTCATCATTTTACAACCCCATCGTCACATCTTGCCGAGATTGCAGTTGCGGATGCAGAGAAGCAGATAAAAGTACAGCGTCTTGCATAAGGCCTGATTCCTTGTCACGGTCCAATGAGGACAACACGATTGAAATTGTTGAATGCACCGACCACATGTGCCCCGTTCGAGTCCATTGGCATTTCAAGAACAACTATATGAACCAATGGAGAGTGAAGCTTACAATTTCTAACTACAATTACAACAAAAACTACTCGAACTGGAACTTGCTGGTCCAACATCCTGGTTTCACTCAAAAAACATCAACCTACAGTTTCAACAGCACTAAACTTCCCACCCTCGGAATCCAAGATGGAGTTTCCCTGTTTTGGGGAATAGATTATTACAACAATGAGCTGTTGCATTCTGATAAAGCTAAAGTGGGTATTGTGACAACAGAAATACTATTGGATAAAGATCCAAATTCTTTCACAATAAGTAATGGATGGGCATTTCCTAGAAGAATATATTTCAATGGTGACAACTGCGAAATGCCTTTACCTGACAGTTTTCCCATGCTGCCAAATCGTAGCTCTACTCTTGCACCTACTTATTCTGGTTTTACTCTCTTGTTTATCCTTTTGTTTCTTCCCCTGTTACTCCTTTAG 1311 0.4378 MVLVVPTLKWMVFFALFIFSDCFDPLDSTGNISVTFDIYQRTDDGYLARVTLQNYHQYRHVEKPGWKLGWKWAKNEVIWSMSGAIATDRGNCSSYSGSQMPHSCKNDPIIVDLSPEVSKNRSEHCCRGGLLSAWSIDPFNAFSSFELEVRNVGDNPLGQAPNNLTLMAPGPGYTCSPLLDTDPSVSSDFGGLRQVPVLRTWKSTCAYSSFLANTLPVCCVSLSSFYNPIVTSCRDCSCGCREADKSTASCIRPDSLSRSNEDNTIEIVECTDHMCPVRVHWHFKNNYMNQWRVKLTISNYNYNKNYSNWNLLVQHPGFTQKTSTYSFNSTKLPTLGIQDGVSLFWGIDYYNNELLHSDKAKVGIVTTEILLDKDPNSFTISNGWAFPRRIYFNGDNCEMPLPDSFPMLPNRSSTLAPTYSGFTLLFILLFLPLLLL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02511 436 Pfam COBRA-like protein 46 208 IPR006918 GO:0010215|GO:0016020
Vian4g02511 436 PIRSF COBRA 1 436 IPR006918 GO:0010215|GO:0016020
Vian4g02511 436 PANTHER PROTEIN COBRA 11 417 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02511 Vian-Chr4 41653988 41656152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02511 21 436 COBRA Gene Family AT3G29810 49.052 5.63e-141 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02511 - - vra:106760500 871.307