Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02438 ATGCATCTCAAGTTGATGGGAAGAGCCTCTGTTGCTGTTCTTCTGTTATCTCTTCTTGCAATTTCTCACTTTCATTTTTCTGGGGCCGAAGACCCCTACAGATTCTTCAACTGGAATGTCACCTATGGCGACATTTTCCCTCTTGGTGTTCGCCAAAGGGGAATCTTAATCAACGGACAATTCCCAGGTCCAGATATTCATTCTGTTACCAACGACAACCTCATCATCAATGTCTTCAATAGTTTGGATGAGCCTTTTCTTCTTTCCTGGAACGGAGTTCAGCAGAGAAGAAACTCGTTTGAAGATGGTGTTTTTGGAACAACATGCCCGATTCCACCAGGGAAGAATTTCACTTACATTCTTCAAGTGAAGGATCAAATTGGAAGCTTTTATTACTTTCCATCTCTTGCATTTCACAAAGCTGCCGGTGGTTTTGGAGGCATCAGGATTCTGAGCAGACCAAGGATTCCGGTGCCATTTTCCGATCCTGCCGGCGATTACACTGTTCTCATTGGAGATTGGTTCAAGTCCAACCACACGACTCTGAAAGCCCATCTTGATAACGGTAAGAAGCTTCCTTTCCCCGATGGAATACTTATCAATGGTCGTGGACCTAATGGGGTGGCTTTAAACGTTGAACAAGGAAAAACTTACAGACTCAGAATATCAAATGTGGGGCTGCAACATTCCCTTAACTTTCGCATTCAGAATCACAAAATGAAACTGGTGGAAGTGGAAGGAACACACACTGTACAAACTACGTACTCCTCTCTTGATGTTCACGTGGGACAATCTTATTCAGTGTTGGTAACTGCAGATCAACCTGCTAAGGACTATTACATTGTGGCTTCCTCACGATTCTCATCCAAGGTTCTCACCACCACTGCAGTTCTTCGCTATAGCAACTCTGCAGGCCCAGTATCAGGCCCACCCCCTGGTGGACCTACGATCCAGGTTGATTGGTCCTTGAATCAGGCCCGCTCAATCAGGACTAACCTTACAGCAAGCGGACCAAGACCGAACCCGCAAGGATCGTATCATTACGGTATGATAAACACGAGCAGGACCATCGTACTAGCGAGTTCTGCTGGTCAAGTGAATGGGAAACAAAGATACGCACTGAACAGCGTGTCTTATGTTGCCCCAGACACCCCTCTCAAGCTCGCAGATTACTTCAAAATCTCTGGTGTTTTCCGCCCCGGAAGCATATCTGACAGACCCACTGGTGGTGGCATCTACCTTGACACATCCGTTTTACAAACTGACTTCAGAGCTTTTGTGGAGATTGTCTTCCAAAACAACGAGAACATCGTTCAAAGCTATCATCTCGATGGCTACTCTTTCTTTGTAGTTGGCATGGATGGGGGACAGTGGACACCCGCTAGCAGGAACCAGTACAATCTCCACGATGCAGTTTCACGTTGTACCACACAGGTGTATCCAATGTCATGGACTGCTATTTATGTTGCCCTTGACAACGTGGGAATGTGGAATTTGAGGTCTGAGTTTTGGGCACGACAATACCTTGGGCAACAGTTATATGTGCGCGTTTATACAGCATCAACCTCAATCAGAGACGAGTTCCCTGTTCCAAAGAATGCAATTCTTTGTGGCAGGGCGAGTGGTAGACACACGCGACCACTCTGA 1647 0.4633 MHLKLMGRASVAVLLLSLLAISHFHFSGAEDPYRFFNWNVTYGDIFPLGVRQRGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGVQQRRNSFEDGVFGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFSDPAGDYTVLIGDWFKSNHTTLKAHLDNGKKLPFPDGILINGRGPNGVALNVEQGKTYRLRISNVGLQHSLNFRIQNHKMKLVEVEGTHTVQTTYSSLDVHVGQSYSVLVTADQPAKDYYIVASSRFSSKVLTTTAVLRYSNSAGPVSGPPPGGPTIQVDWSLNQARSIRTNLTASGPRPNPQGSYHYGMINTSRTIVLASSAGQVNGKQRYALNSVSYVAPDTPLKLADYFKISGVFRPGSISDRPTGGGIYLDTSVLQTDFRAFVEIVFQNNENIVQSYHLDGYSFFVVGMDGGQWTPASRNQYNLHDAVSRCTTQVYPMSWTAIYVALDNVGMWNLRSEFWARQYLGQQLYVRVYTASTSIRDEFPVPKNAILCGRASGRHTRPL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02438 548 SUPERFAMILY Cupredoxins 160 340 IPR008972 -
Vian4g02438 548 PANTHER MULTI-COPPER OXIDASE 52 517 IPR045087 -
Vian4g02438 548 Pfam Multicopper oxidase 384 520 IPR011706 GO:0005507|GO:0016491
Vian4g02438 548 SUPERFAMILY Cupredoxins 350 539 IPR008972 -
Vian4g02438 548 FunFam Monocopper oxidase-like protein 164 338 - -
Vian4g02438 548 Pfam Multicopper oxidase 166 302 IPR001117 -
Vian4g02438 548 Gene3D - 33 154 IPR008972 -
Vian4g02438 548 Gene3D - 164 339 IPR008972 -
Vian4g02438 548 FunFam L-ascorbate oxidase homolog 33 154 - -
Vian4g02438 548 Gene3D - 349 544 IPR008972 -
Vian4g02438 548 CDD CuRO_2_AAO_like_1 165 300 IPR034271 -
Vian4g02438 548 CDD CuRO_1_AAO_like_1 35 150 IPR034273 GO:0005507
Vian4g02438 548 CDD CuRO_3_AAO_like_1 382 502 IPR034275 GO:0005507
Vian4g02438 548 Pfam Multicopper oxidase 40 153 IPR011707 GO:0005507
Vian4g02438 548 FunFam Monocopper oxidase-like protein 350 547 - -
Vian4g02438 548 SUPERFAMILY Cupredoxins 29 180 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02438 Vian-Chr4 41030827 41036543 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02438 - - gmx:100815570 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02438 4 41030827 41036543 Vian4g02438 4 41030827 41036543 ECH
Vian7g00947 7 17655682 17659352 Vian4g02438 4 41030827 41036543 PCT