Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02434 ATGGGAGACACAGAGAGTTGCAATAGCGGAATTTTGAACTCTGGATGGAATCATCGATGTCCGAAACAGAGACAGAAGGTCGGAGTTTACAACGAGGTTTTGTGTAGGCTTAAGGAATTGAATGTCCCAGAAGCTGTGGTTCCTGGTTTTGAGGACGATCTTTGGGCGCACTTCTATCGCCTTCCCGCAAGGCACACCAAATCTTCGTATGCGTTGGACATGAATGTGGAGAGGGCAGAAGAAGTTCTTATGCACAAGAGGTTACTGGACATCGCCGGAGGCCCAACTACAGCAATCGGACCTGCAATTGAAGTCCGTCTTGTACAGGTTCGTTCTGCTTCTGCTTCTACCGGTGGTTCTAGTAAATCCCTTCTTTTAAATTCACAAAGTAAAGTTTGTTCTGAAGATTCTGGTATTCCAGGCAGCATGAGGCATCTTCCATCCTCCACCTGCCTTCGGCCAATGCATGAAATCACAATTTCAACAAATGACAAGCCAAAACTTCTGAGTCAGCTGACTTCCTTACTTTCTGAGACTGGGTTGGACATTCTAGAAGCACATGCTTTTTCGACAACAGACGGCTATTCGTTGGATGTTTTTGTTGTTGGTGGTTGGCCAATAGAGCAACATCAATTGAAAGAAAATGGGAGTCTTCCTACTAGTACTACTGCAAAGCAAGAGCAAACCGAGATGAACTTTATCTGGAGAATTGATGCCGGGCGTCTGAGATATGAAAAGAAAATTGCATCTGGACCTTTGACTGATTTGTATAAAGGTACATTCTGCAATCAAGATGTAGCTATCAAGGTTTTAAAGCACGAGAATTTGAATGAAAATATACAAAGGGAGTTTGCTCAGGAAGTGTATATCCTAAGTAAAATTCAGCACAAAAATGTAGTTAAATTTGTTGGCGCTTGTACAAAACCCCCAAACCTGTACCTGGTCACAGAATACATGCCTGGTGGAAGTATGTTCGACTTTTTGCATAAACAGAAGACCGCCCTTGCTCTTCCATGTTTACTCAAAGTGGCCATTGATGTTTCCGAAGGAATGAAATATTTGCATCAGAATAATATCATACATCGTGACCTTAAAGCGGCTAATCTTTTGATAGATGAGAATGGGCTTCCTTATGAGCATTTGTCCCCATTGCAAGCAGCAGTAGGAGTGATCCAGAAGGGTTTAAGGCCTAAAATTCCAAGCCATAGTCATTCAAAGTTAGTGGAATTGCTTCACTGGTGTTGGCACCACGATTCATCTTTGAGACCCAATTTCTCAGAAATTCTGGAATTTCTGCTACGTGTGACCAAGACGGTTACTGGGGAATGTGAAGGCTAG 1338 0.429 MGDTESCNSGILNSGWNHRCPKQRQKVGVYNEVLCRLKELNVPEAVVPGFEDDLWAHFYRLPARHTKSSYALDMNVERAEEVLMHKRLLDIAGGPTTAIGPAIEVRLVQVRSASASTGGSSKSLLLNSQSKVCSEDSGIPGSMRHLPSSTCLRPMHEITISTNDKPKLLSQLTSLLSETGLDILEAHAFSTTDGYSLDVFVVGGWPIEQHQLKENGSLPTSTTAKQEQTEMNFIWRIDAGRLRYEKKIASGPLTDLYKGTFCNQDVAIKVLKHENLNENIQREFAQEVYILSKIQHKNVVKFVGACTKPPNLYLVTEYMPGGSMFDFLHKQKTALALPCLLKVAIDVSEGMKYLHQNNIIHRDLKAANLLIDENGLPYEHLSPLQAAVGVIQKGLRPKIPSHSHSKLVELLHWCWHHDSSLRPNFSEILEFLLRVTKTVTGECEG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02434 445 Gene3D Transferase(Phosphotransferase) domain 1 315 378 - -
Vian4g02434 445 ProSiteProfiles Protein kinase domain profile. 242 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian4g02434 445 ProSiteProfiles ACT domain profile. 157 231 IPR002912 -
Vian4g02434 445 SUPERFAMILY Protein kinase-like (PK-like) 221 432 IPR011009 -
Vian4g02434 445 Gene3D Transferase(Phosphotransferase) domain 1 379 443 - -
Vian4g02434 445 Pfam Protein tyrosine and serine/threonine kinase 377 432 IPR001245 GO:0004672|GO:0006468
Vian4g02434 445 Pfam Protein tyrosine and serine/threonine kinase 243 374 IPR001245 GO:0004672|GO:0006468
Vian4g02434 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 359 371 IPR008271 GO:0004672|GO:0006468
Vian4g02434 445 SUPERFAMILY ACT-like 155 204 IPR045865 -
Vian4g02434 445 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 376 432 - -
Vian4g02434 445 FunFam Serine/threonine-protein kinase isoform 1 232 320 - -
Vian4g02434 445 SMART serkin_6 242 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian4g02434 445 Gene3D Phosphorylase Kinase; domain 1 232 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02434 Vian-Chr4 40971249 40976697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02434 5 439 MAP Kinase Kinase Kinase AT4G35780 43.525 1.42e-137 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vian4g02434 PK_Tyr_Ser-Thr 4.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02434 - - vra:106761427 750.355