Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02433 ATGACCCAAAGAGAGGAAGTTGTGCTTGATTTTGAAGACAACAATGGCCGCAGCAACAGCAAAGATGAAAATTCAGCATCGAAAGGTGTTGTCAACGGTCAAAGTGACAAGCTTCGTCAAGACTTGCAGGAAAAGCGCAGAGGCAGTGAATCAACAAGAAAGAAAAAGCAGGATCAGCAAAAAACCGAAGAAAGCCACCTCCAAACTTCACATTCACAAGAAAGCGTGGTGAGGTCTTCTTCGAACAATTCAACTCCACGATACTCGTGGAAATCATCAATAAGCAGAACAAAGTCTCGGCTGATAGACCCTCCTGAGGAATCATGCCCAAATTCAGAATCAAGTGAACAAAAAGCGGCAGAAAATGATGACAGTGTTGAGGACATGCCTGAAATTTACAAGAAAACGAGGTTCAGTGCGTTCTCGCTGCTTCAGTGGCTATGTCTGGCCTTAATAATCGTAGCCTTGCTTTCAAACATTTGGATATCGTGCTTGCAAAAACTCAAACTCTGTGGCCTTCCCCTGTGGGAATGGGAGACAATGATTTTGGTTATTCTTTGTGGGCGTTTGCTCTCAGGTTGGATAATCAAGCTAATCGTCTTCTTCGTGGAACGCAATTTCATACTGCGAAAACGAGTGCTGTATTTTGTGTACGGTTTGAAACACTCGGTGAAAAACTGTGTCTGGTTGGGTCTTGTTCTGCTGGTGTGGCATTTTCTTTTGGTCAACGCGGTGAAGAAAAAGGTCAACGACAGGATTTTGTCGTGTGTGACAAAGGTTGTGGTGTGTCTGTTCATCGGCACTCTTTTGTGGCTCCTTAAAACGATCCTCGTGAAGGTCTTCGCCTTGCACTTCCACGTGAAAACGTTCTTCGAACGGATTCGGGAGGCTCTGTTCAGCCAATACGTGATCGAAACGCTGTCGTGTGATCGATTGAGGGAAGAGGAAGAAGAAGAAGAAGGTGAAGATAGATCCGTTGGGAGGGTGTTGTGTAATAAGAAGAAGAAGCAAGATGAGGAAATGTCGATCGAGCAGTTGCGTAGGTTGAATAAGAGAAATATATCAGCGTGGAATATGAAGAGAATGATCAACATCGTCATGCATGGGTCGTTTACTACATTGGACGAACGTATTTTGTGTTCAGATGTTGAGGATGAGCCTTTGCTGCAACTTCGAACCGAAAACCAAGCAAAGATCGCAGCTCAGAAAATTTTTCATAGCGTTGCGCAACCAGGATCCCAATGCATTTTCTTGCAAGATGTGATGCAGTTCATGCGAAGAGACGAGGCTTTGAAGTCAATGGATCTGTTGGGAGCAGCGTGTGCAGAACATGGAATTAGCATGTCTTCTCTTAGAGACTGGATGGTGAATGCTTTCAGGGAGAGAAGGGCACTGGCACTATCACTGAAAGACACGAAAACTGCTGTGGATGATCTCCATAACATGTTGAACATGATTGTCGGCATTGTCATTTTGATTGTCTGGCTTGCCATTCTAGGAACTCCAATCCTACACTTCCTTGTCTTCATGGGATCCCAGCTTCTGTTGGCAGTGTTTGTGTTCGGGAATTCTTGCAGAACTGTTTTTGAAGCAATCATCTTCTTATTTGTGATGCACCCATTTGATGTTGGCGATCGATGTGAAGTAGATGGAATCCAGATGGTAGTGGAAGAGATGAATATACTGACAACAGTGTTTCTGAAGTATATTGAAAGGAAGAATGAACACTGGCATGCGGCACCAATGGTGATAATGAAGGATGTGGAAGAGTTGAACAAAGTGAACATGTCAGTGTGGCTTACACACAAAATGAATTATCAGGACATGAAAGAAAGATGGAACAGGAGAGCGGAGTTGATTGAAGAGATGATCAAAGTGTTGAAGGAACTTGATATTGAATACAGGCTTCTCCCCTTTGATGTCAATCTTACAAATCAACCTTCTCTGCTCTCCAATTGGAAAACTTGTGTCACCTCTCTCTCTTAG 1986 0.4366 MTQREEVVLDFEDNNGRSNSKDENSASKGVVNGQSDKLRQDLQEKRRGSESTRKKKQDQQKTEESHLQTSHSQESVVRSSSNNSTPRYSWKSSISRTKSRLIDPPEESCPNSESSEQKAAENDDSVEDMPEIYKKTRFSAFSLLQWLCLALIIVALLSNIWISCLQKLKLCGLPLWEWETMILVILCGRLLSGWIIKLIVFFVERNFILRKRVLYFVYGLKHSVKNCVWLGLVLLVWHFLLVNAVKKKVNDRILSCVTKVVVCLFIGTLLWLLKTILVKVFALHFHVKTFFERIREALFSQYVIETLSCDRLREEEEEEEGEDRSVGRVLCNKKKKQDEEMSIEQLRRLNKRNISAWNMKRMINIVMHGSFTTLDERILCSDVEDEPLLQLRTENQAKIAAQKIFHSVAQPGSQCIFLQDVMQFMRRDEALKSMDLLGAACAEHGISMSSLRDWMVNAFRERRALALSLKDTKTAVDDLHNMLNMIVGIVILIVWLAILGTPILHFLVFMGSQLLLAVFVFGNSCRTVFEAIIFLFVMHPFDVGDRCEVDGIQMVVEEMNILTTVFLKYIERKNEHWHAAPMVIMKDVEELNKVNMSVWLTHKMNYQDMKERWNRRAELIEEMIKVLKELDIEYRLLPFDVNLTNQPSLLSNWKTCVTSLS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02433 661 PIRSF Memb_At2g17000 567 656 IPR016688 -
Vian4g02433 661 PIRSF Memb_At2g17000 2 569 IPR016688 -
Vian4g02433 661 MobiDBLite consensus disorder prediction 20 37 - -
Vian4g02433 661 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 23 569 IPR016688 -
Vian4g02433 661 Coils Coil 39 59 - -
Vian4g02433 661 Coils Coil 610 630 - -
Vian4g02433 661 MobiDBLite consensus disorder prediction 69 99 - -
Vian4g02433 661 SUPERFAMILY Sm-like ribonucleoproteins 530 568 IPR010920 -
Vian4g02433 661 MobiDBLite consensus disorder prediction 1 126 - -
Vian4g02433 661 MobiDBLite consensus disorder prediction 38 68 - -
Vian4g02433 661 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02433 Vian-Chr4 40966761 40969287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02433 49 648 Mechanosensitive Ion Channel Family AT1G78610 44.741 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02433 K22048 - tcc:18591637 658.292