Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02414 ATGGCATCATCATCTCCATGTGACTGTTGGCCCCATCTTTCTCACTCACTCTCTTCTCCTTCTCCTTCTTCTCCTTCTTCTTCCTCTCTCTCTCAAACCCTCCTTCCTCCTCCTCCTCCTTCCGTTGAACATGTCTGGAACGACCTCAAACTCTCCTCCCTCTCCAACTCCCCCGTTGACTTCAACCACTCCTCTTCTCATTCTTCTCTCCTCTCTCTCTCTCCCTCTCACAACCACCACTCTCTTCTCTCTCTCTCCAACGCTTCCTTCCACTCCAACAACAACACACGCCACCAAGATCAACACCATAATCGCATCATGAAGAATCGAGAATCCGCGGTTCGCTCCAGAGCCAGAAAACAGGCTTATAGAAAAGGTTTGGAAGATGAAATTGCTCGGTTGACGGAAGAGAATTCGAGACTGAGAAAAGAATTGAAAGAGTTGCAGTTCTCTTTATCTTCTTCAGAGAATAGCCCTCAGGGAACCAGTGCTCCATGTAGAACCACGTCGTCTCCATTCTGA 522 0.4828 MASSSPCDCWPHLSHSLSSPSPSSPSSSSLSQTLLPPPPPSVEHVWNDLKLSSLSNSPVDFNHSSSHSSLLSLSPSHNHHSLLSLSNASFHSNNNTRHQDQHHNRIMKNRESAVRSRARKQAYRKGLEDEIARLTEENSRLRKELKELQFSLSSSENSPQGTSAPCRTTSSPF 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02414 173 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 76 149 IPR043452 GO:0003700|GO:0045893
Vian4g02414 173 MobiDBLite consensus disorder prediction 96 119 - -
Vian4g02414 173 FunFam BZIP transcription factor bZIP46 99 155 - -
Vian4g02414 173 SMART brlzneu 95 161 IPR004827 GO:0003700|GO:0006355
Vian4g02414 173 Gene3D - 100 154 - -
Vian4g02414 173 MobiDBLite consensus disorder prediction 84 119 - -
Vian4g02414 173 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 99 149 IPR004827 GO:0003700|GO:0006355
Vian4g02414 173 MobiDBLite consensus disorder prediction 1 31 - -
Vian4g02414 173 CDD bZIP_plant_BZIP46 103 155 - -
Vian4g02414 173 Coils Coil 117 158 - -
Vian4g02414 173 MobiDBLite consensus disorder prediction 59 78 - -
Vian4g02414 173 SUPERFAMILY Leucine zipper domain 104 149 IPR046347 GO:0003700|GO:0006355
Vian4g02414 173 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 105 119 IPR004827 GO:0003700|GO:0006355
Vian4g02414 173 Pfam bZIP transcription factor 101 149 IPR004827 GO:0003700|GO:0006355
Vian4g02414 173 MobiDBLite consensus disorder prediction 1 45 - -
Vian4g02414 173 MobiDBLite consensus disorder prediction 150 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02414 Vian-Chr4 40802349 40804342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02414 100 173 bZIP Transcription Factor Family AT3G56850 50.000 1.22e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian4g02414 bZIP_1 2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02414 K14432 - vra:106761574 232.646