Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02412 ATGGATACAAAAACGGAATTTTGTTCAGGTATATGGCCAGAGTCAGCAAGCTTTAGCGACAAGGGAATGGGTCCCGTTCCATCCCGTTGGAAAGGCACTTGTATGAACTCCTTTAACTTCAATTCATCAAATTGTAACAGGAAGATAATTGGAGCAAGGTATTACCGTGACCCTAATGGAGACAAAGTGTTTGAGACACCAAGGGATGTAGACGGCCACGGAACCCACGTAGCAGCCACAGCGGCGGGAGTCACCGTGCCCGGTGTCTCATATTACGGAGTGGCGGCGGGGACTGCCCAGGGTGGGTCCCCGGAATCACGGTTGGCGATTTACCAAGTGTGCTTCAAGTATGAATGCCCTGGCTCGGCGATTCTTGCAGCGTTTGACGATGCCATTGCTGATGGGGTCGATGTGATTTCGGTGTCGATTGGTTCCATCCCTGGGTTACGATCCGAGTTGAAATACGACACAATCGCCATCGGGGCATTCCACGCCGTGGAGCGCGGCATTTTGGTGGTTGCCTCCGCGGGAAACGGCGGACCATACTTAAACACGGTGGTGAATGACGCACCTTGGATTTTTAGCGTTGCTGCCTCTTCGATAGACAGGGATTTTAAGTCCAACCTTGCCTTTGGTGATAACAAAGTCATCAAGGGTGAAGCTCTTAATTTCTCCCCCCTTTCAAATCTACCCAAATATCCACTTGTATATGGTGAGTCTGCCAAAGCAAAGGACGCCAGGTCAGCTGACGCAAGGCAATGCTTCCCAGGTGCATTCGCTAAACGTCTAGTAAAAGGGAAGATTGTCATATGTGACGGTAAAGATCATTCATATAGAATTAGTTTGAAAGTTGATGCTGTGCGGGAGGTAAGTGGAGTAGGTGTGGTTCACATTTCTGACCCAATAGTAGGAGCAGAAAGAAAAGATTTTGGAGACTTCCCAGCAACAGAGATAAGTTCTAAAGATGCTGACATAATCTTTCAGTATGTTAATTCAACCAGCAATCCAGTGGCAACAATTCTCCCAACAGTTTCAATCCTTGATTTTAAGCCTGCGCCCATAATCCCATCCTTTTCAGGAAGAGGGCCTTCAGACTTTTCCAAGAATATTCTCAAGCCTGATATTGCAGCACCAGGGGTCAACATTCTTGCAGCATGGATCGGAAATCACAGAGAAGGCGTTCCTAAACATAAAAAGCCCTCACAGTTCAATATCCTCTCAGGTACTTCTATGGCATGTCCACATGTTTCAGGACTTGCAGCTACCATCAAATCTCAAAACCCCACTTGGAGTGCTTCTGCAATCAAATCAGCAATAATGACCACTGCAACTCAAAAGAACAATTTGAAGGCTCCCATAAGAACGGAGACAGGATCAACAGCCACACCTTATGACTATGGAGCAGGGCAAATGACACTGTATGGACCATTCCACCCAGGGCTAGTTTATGAAACCAACACAGTTGACTACTTGAACTACTTATGCTATATTGGATATAATGTAACCGTGGTTAAGATTATATCGAGATCTGTTCCTAATAATTTCAGCTGCCCCAAAGATTCTAGTTCTCATCATATATCCAACATCAACTATCCTTCCATAGCAATCTCCGACCTCGAAGGGAAAAATGTCGTAGAAGTTACTAGAACTGTTACAAATGTTGGCGAAGAGAACGAAACAATTTACTCTCCTGTTATCGATGCTCCTAGAGGTATAAAGGTCAACTTGATTCCAAATAAACTTCAATTTACGAAAAATAGTAGAAAACTAAGCTACCGAGTTATCTTTTCATTCACGTCGACCATGTCGATGGACCATTTATTTGGATCAATTACTTGGAGTAATGGTAAATATGATGTTCGAAGTCCATTTGTATTAATTAAGAGCTAA 1890 0.4444 MDTKTEFCSGIWPESASFSDKGMGPVPSRWKGTCMNSFNFNSSNCNRKIIGARYYRDPNGDKVFETPRDVDGHGTHVAATAAGVTVPGVSYYGVAAGTAQGGSPESRLAIYQVCFKYECPGSAILAAFDDAIADGVDVISVSIGSIPGLRSELKYDTIAIGAFHAVERGILVVASAGNGGPYLNTVVNDAPWIFSVAASSIDRDFKSNLAFGDNKVIKGEALNFSPLSNLPKYPLVYGESAKAKDARSADARQCFPGAFAKRLVKGKIVICDGKDHSYRISLKVDAVREVSGVGVVHISDPIVGAERKDFGDFPATEISSKDADIIFQYVNSTSNPVATILPTVSILDFKPAPIIPSFSGRGPSDFSKNILKPDIAAPGVNILAAWIGNHREGVPKHKKPSQFNILSGTSMACPHVSGLAATIKSQNPTWSASAIKSAIMTTATQKNNLKAPIRTETGSTATPYDYGAGQMTLYGPFHPGLVYETNTVDYLNYLCYIGYNVTVVKIISRSVPNNFSCPKDSSSHHISNINYPSIAISDLEGKNVVEVTRTVTNVGEENETIYSPVIDAPRGIKVNLIPNKLQFTKNSRKLSYRVIFSFTSTMSMDHLFGSITWSNGKYDVRSPFVLIKS 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02412 629 CDD Peptidases_S8_3 9 444 IPR034197 -
Vian4g02412 629 Gene3D Peptidase S8/S53 domain 9 490 IPR036852 GO:0004252|GO:0006508
Vian4g02412 629 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 9 625 IPR045051 -
Vian4g02412 629 FunFam subtilisin-like protease SBT1.5 202 347 - -
Vian4g02412 629 CDD PA_subtilisin_like 212 340 - -
Vian4g02412 629 ProSitePatterns Serine proteases, subtilase family, serine active site. 408 418 IPR023828 -
Vian4g02412 629 PRINTS Subtilisin serine protease family (S8) signature 69 82 IPR015500 -
Vian4g02412 629 PRINTS Subtilisin serine protease family (S8) signature 407 423 IPR015500 -
Vian4g02412 629 ProSiteProfiles Serine proteases, subtilase domain profile. 1 477 - -
Vian4g02412 629 Pfam Subtilase family 61 455 IPR000209 GO:0006508|GO:0008236
Vian4g02412 629 Gene3D - 202 347 - -
Vian4g02412 629 Pfam Fibronectin type-III domain 528 625 IPR041469 -
Vian4g02412 629 FunFam Subtilisin-like protease SBT1.5 6 213 - -
Vian4g02412 629 Gene3D - 494 628 - -
Vian4g02412 629 SUPERFAMILY Subtilisin-like 39 474 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02412 Vian-Chr4 40780481 40783094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02412 9 626 Subtilisin-like Serine Gene Family AT1G20150 52.456 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02412 K25898 - vra:106760858 1147.88