Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02411 ATGCAAGGCAATAAACTTTTGTTGCATATATTCACTCTTTTTGTGTTTCTTGGAGCCACAAGTTCATCACCAGAAAATGGTAGCAACAGTAAACAAGTTTATATCGTCTATATGGGAGCTGCGGATTCTTCCAATGCTTCTCTTCGGAATGACCATGCTCAGCTTCTCAATGCAGTGATAAGAAGGAATGACAAGGCTTTGGTGCGGAACTACAAGCATGGTTTCTCAGGGTTCGCAGCTCGTTTATCAAAAGAGGAGGCAAATTCAATTGCTCAGAAACCTGGTGTTGTGTCTGTTTTTCCTGACCCCATTCTGAAGCTCCACACAACTCGTTCCTGGGATTTCCTAAAATATCAAACTCACGTCAAAATCGACGCCAACCCAAAAACGCTCTCCAATTCTTCTTCCTCCTCAGACGTTATCCTTGGCATATTAGACACAGGTATATGGCCAGAGGCAGCGAGTTTTAGTGAGGAGGGAATGGGTCCTGTTCCATCGCGCTGGAAAGGCACGTGCGTGAAATCATCAGACTTTAATGCATCTAATTGCAACAGGAAACTAATTGGGGCAAGATTTTACACTGACCCTAATGGGGAAGACGGTGACAACACGCCACGGGATTCGCTTGGCCACGGGACCCATGTGGCCTCCACGGCGGTGGGAGCCGCCGTGACCAACGCATCGTACTACGGTCTGGCGGCGGGGAGCGCCAAGGGTGGGTCCCCAGAATCAAGATTGGCGGTTTACAGAGTGTGTTCTAACTTTGGGTGCAGTGGGTCCGCCATTCTCGGGGCGTTTGACGATGCCATTGCCGACGGAGTCGATGTTCTGTCGCTGTCGCTCGGTGCATCACCCGGATTTCGACCCGACTTGACAAGCGACCCGATTGCGATCGGAGCGTTCCACGCCGTGGAGCGCGGCATCGTGGTGGCCTGCTCCGCTGGGAATGATGGACCGAGCTCGAACACGGTTGTGAACGATGCGCCTTGGATTTTAACCGTTGCAGCTTCGACCATCGACCGAGATTTTCAGTCCGACGTGGTCCTGGGTGGTAACAAAACCATCAAGGGTAGGGCTATAAATTTCTCCCCTCTTTCAAATTCGGCTCAGTATCCATTGGTATACGGCGAGTCTTCCAAGACGAACGAGAGTAGTTTAACTGAAGCAAGACAATGTCACCCAGATTCATTAGATGCAAGCAAAGTCAAAGGGAAGATTGTGCTATGTGATGGCAGAAATGATGAATACTCAACTAGTGAAATAATAGACACAGTGAAAACCCTGGGAGGAATAGGCCTAGTTCATATTACGGACTCAAATGGAGCAATAGCTTCATATTACGGGGACTTCCCTGCAACGGTTATTAGCTCAAAAGATGGTGCCACAATACTGCAATACATAAATTCATCCAACAATCCAGCAGCAACAATTCTACCAACAACTACAGTTCTTGATTATAAACCTGCTCCCCTTGTGCCAGACTTTTCATCAAGAGGACCTTCATCTCTATCAAGCAATATTCTAAAGCCTGATATTGCAGCACCAGGAGTTAATATTCTGGCCGCATGGATTGAAAGTAGCTCAGACGAAGTTCCCAAAGGAAGAAAGCCCTCACAGTACAACATAATCTCAGGGACTTCAATGGCCTGTCCACATGTTTCAGGACTTGCTAGCACTGTCAAAGCACGCAACCCCAGTTGGGGTCCCTCTGCAATCAAATCTGCCATCATGACTTCAGCAATTCAAAGTGACAACACGAAGACAGCTATAACAACCGATTCAGGGTCAGTAGCCACACCTTATGACTATGGAGCAGGGGAGATGACAACATCTGAATCATTGCAGCCAGGGCTAATTTATGAAACCGACACTATCGACTACTTAAACTTCTTGTGTTACATTGGACTTGACATAGCCACGGTTAAGGTCATCTCCAGAACTGTTCCTGACAATTTCAATTGCCCCAAGGATTCAAGTTCTGATCTTGTCTCCAACATCAACTACCCTTCCATAGCAGTAAACTTCACTGGCAAAGGAACTGTCAGTGTGAGTAGAACTGTCACAAATGTTGGTGAAGAAGATGAAACAGTGTACTCCCCAGTGGTTGAGGCTCCCAGTGGAGTAAAAGTCACACTAACTCCAAATAAATTACAATTTACGAAGAGTAGTAAAAAACTAAGTTACAAAGTTATTTTCTCCACAACTTTAACTTCCCTAAAGGAAGATCTGTTTGGATCTATCACTTGGAGTAACGCCAAATATATGGTTCGAAGTCCTTTTGTATTAACTAAGTAA 2295 0.4619 MQGNKLLLHIFTLFVFLGATSSSPENGSNSKQVYIVYMGAADSSNASLRNDHAQLLNAVIRRNDKALVRNYKHGFSGFAARLSKEEANSIAQKPGVVSVFPDPILKLHTTRSWDFLKYQTHVKIDANPKTLSNSSSSSDVILGILDTGIWPEAASFSEEGMGPVPSRWKGTCVKSSDFNASNCNRKLIGARFYTDPNGEDGDNTPRDSLGHGTHVASTAVGAAVTNASYYGLAAGSAKGGSPESRLAVYRVCSNFGCSGSAILGAFDDAIADGVDVLSLSLGASPGFRPDLTSDPIAIGAFHAVERGIVVACSAGNDGPSSNTVVNDAPWILTVAASTIDRDFQSDVVLGGNKTIKGRAINFSPLSNSAQYPLVYGESSKTNESSLTEARQCHPDSLDASKVKGKIVLCDGRNDEYSTSEIIDTVKTLGGIGLVHITDSNGAIASYYGDFPATVISSKDGATILQYINSSNNPAATILPTTTVLDYKPAPLVPDFSSRGPSSLSSNILKPDIAAPGVNILAAWIESSSDEVPKGRKPSQYNIISGTSMACPHVSGLASTVKARNPSWGPSAIKSAIMTSAIQSDNTKTAITTDSGSVATPYDYGAGEMTTSESLQPGLIYETDTIDYLNFLCYIGLDIATVKVISRTVPDNFNCPKDSSSDLVSNINYPSIAVNFTGKGTVSVSRTVTNVGEEDETVYSPVVEAPSGVKVTLTPNKLQFTKSSKKLSYKVIFSTTLTSLKEDLFGSITWSNAKYMVRSPFVLTK 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02411 764 Gene3D - 340 484 - -
Vian4g02411 764 FunFam subtilisin-like protease SBT1.5 340 484 - -
Vian4g02411 764 Gene3D Peptidase S8/S53 domain 139 627 IPR036852 GO:0004252|GO:0006508
Vian4g02411 764 ProSiteProfiles Serine proteases, subtilase domain profile. 112 615 - -
Vian4g02411 764 CDD PA_subtilisin_like 346 477 - -
Vian4g02411 764 Pfam PA domain 370 463 IPR003137 -
Vian4g02411 764 FunFam Subtilisin-like protease SBT1.5 139 351 - -
Vian4g02411 764 ProSitePatterns Serine proteases, subtilase family, histidine active site. 211 221 IPR022398 -
Vian4g02411 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 108 IPR037045 -
Vian4g02411 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 761 IPR045051 -
Vian4g02411 764 Pfam Fibronectin type-III domain 665 761 IPR041469 -
Vian4g02411 764 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
Vian4g02411 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Vian4g02411 764 FunFam Subtilisin-like protease SBT5.3 22 108 - -
Vian4g02411 764 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Vian4g02411 764 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Vian4g02411 764 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Vian4g02411 764 SUPERFAMILY Subtilisin-like 48 718 IPR036852 GO:0004252|GO:0006508
Vian4g02411 764 Gene3D - 631 764 - -
Vian4g02411 764 CDD Peptidases_S8_3 105 581 IPR034197 -
Vian4g02411 764 Pfam Subtilase family 137 606 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02411 Vian-Chr4 40773613 40776892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02411 34 763 Subtilisin-like Serine Gene Family AT1G20150 53.476 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02411 K25898 - gmx:100820194 1293.1