Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02408 ATGGCTGTGTTTACGAAGTTCTTGAACTGTCGTACAACCACCTTAATGCTCCGTTTGATGTTACTGTTAGTTTTATCGTTGAGAACGAAGGGCTTGGTGAACCTGCCACCAAATATTTCAATTCCCGCAGTGATAGGTTTCGGAGATTCGATCATTGACCCGGGCAACAACAACAAGGTTAAAACGCTGGTGAAGTGTAACTTCCCTCCTTACGGTAAAGACTTCGACGGAGGAATTCCAACCGGTAGATTTTGCAACGGAAAAATTCCGTCGGATTTGATAGTTGAAGAACTGGGTATCAAGAAGCTTTTACCAGCTTATTTGGATCCAAATCTCAAGCCAGACGACCTTCTTACCGGAGTGTGCTTTGCTTCCGGCGCTTCCGGATACGATCCTCTAACGCCAAAAATAGCGTCGGTGATATCAATGTCCGAACAACTAGAAATGTTCAAAGAATACGTAGAGAAGCTGAAACAAATTGTTGGACTGGATAGAACCAACTTCATCTTAGCCAACAGTTTTTTCCTTGTGGTAGCCGGAAGTGACGACATTGCAAACACCTATTTTGTCGCTCGCGCTCGTCAATTACAGTATGATATCCCTGCTTACACTGATCTCATGTGCAATTCCGCTACTGATTTCTTGAAGGAATTATATGGACTCGGAGCACGAAGAATCGGAGTACTGAGTGCACCACCGATTGGTTGCGTTCCATCGCAAAGAACACTTGCCGGAGGCTTGGAAAGAGAATGCGCTGGGGACTACAATTACGCGGCCAAGTTATTTAACTCTAAACTCTCAAGCAAACTTGATTCTCTGAGTGAGTTGCCCGATAGTAGGATCGTTTACATTGACGTTTACAACCCCCTAATGGATATCATTGTCAACTACCAAAGCTATGGCTATGAAGTTATGGACAGAGGCTGCTGTGGCACAGGGAAATTGGAGGTTTCTGTTCTCTGCAACCGTTTGGATGCAACATGTTCCGATGCTTCTAAATATGTGTTTTGGGATAGCTATCATCCTACTGAAAAAGTATACAAACAGCTCGTAGCCCAAATCCTTCAAAACTATTTAAGTCGCTTCTTCTGA 1092 0.4386 MAVFTKFLNCRTTTLMLRLMLLLVLSLRTKGLVNLPPNISIPAVIGFGDSIIDPGNNNKVKTLVKCNFPPYGKDFDGGIPTGRFCNGKIPSDLIVEELGIKKLLPAYLDPNLKPDDLLTGVCFASGASGYDPLTPKIASVISMSEQLEMFKEYVEKLKQIVGLDRTNFILANSFFLVVAGSDDIANTYFVARARQLQYDIPAYTDLMCNSATDFLKELYGLGARRIGVLSAPPIGCVPSQRTLAGGLERECAGDYNYAAKLFNSKLSSKLDSLSELPDSRIVYIDVYNPLMDIIVNYQSYGYEVMDRGCCGTGKLEVSVLCNRLDATCSDASKYVFWDSYHPTEKVYKQLVAQILQNYLSRFF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02408 363 Gene3D SGNH hydrolase 37 360 IPR036514 -
Vian4g02408 363 FunFam GDSL esterase/lipase APG 33 359 - -
Vian4g02408 363 Pfam GDSL-like Lipase/Acylhydrolase 46 351 IPR001087 GO:0016788
Vian4g02408 363 CDD SGNH_plant_lipase_like 42 358 IPR035669 -
Vian4g02408 363 PANTHER GDSL ESTERASE/LIPASE EXL3 23 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02408 Vian-Chr4 40743849 40747133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02408 21 357 Pollen Coat Proteome AT1G75910 38.889 3.55e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02408 - - gmx:100793078 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02408 4 40743849 40747133 Vian4g02408 4 40743849 40747133 ECH
Vian7g00508 7 12460191 12462203 Vian4g02408 4 40743849 40747133 PCT