Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02395 ATGGATTCACCCACGCTCACATCAACAACATCGTCAATAGAAATGGATTCACCCACGCTCACATGCAACGCTGACGAGAGGTTTTCGCCAAAGTTTCAATTTTTACGCTCAAAAGGTGCTTCTGTTTCTGATATCGTTCACCTTGTTAATAGGTGCCCCAGAATCCTCGTATCCAGCCTCAAGAACAACGTGATCCCCTCCTTCGAATTGGTGATACAATGTGGAGGAGACGAGCGTTGTGAAAGCTATAATTTTAGAGGAGACAATGCAGATGACGAGTACGAGATAGAGAGTCATTAA 300 0.4433 MDSPTLTSTTSSIEMDSPTLTCNADERFSPKFQFLRSKGASVSDIVHLVNRCPRILVSSLKNNVIPSFELVIQCGGDERCESYNFRGDNADDEYEIESH 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02395 99 Gene3D Transcription termination factor 3, mitochondrial 7 83 IPR038538 -
Vian4g02395 99 SMART mt_12 46 77 IPR003690 GO:0003690|GO:0006355
Vian4g02395 99 SMART mt_12 10 41 IPR003690 GO:0003690|GO:0006355
Vian4g02395 99 Pfam mTERF 17 73 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02395 Vian-Chr4 40632773 40633620 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vian4g02395 mTERF 4.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02395 K15032 - vum:124846308 105.916