Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02375 ATGGGCAAATCTACCTCCTGCTTCAAGCTAATCACTTGCGGTGGCGATGCGGCCGATAAGGACGACTACCACCAAGTCTCCGAGATCAAGGAGTCTAATGATAAACGTGGTTGGAGTTTTCGCAAGAAATCTGCAAGGCATCGTGTGCTTAGCAATACTGTGATAGCAGAGGCTCCATCTTCGACAAATAAGGAAAGTGCAGAATGTACTAATTTTAATTTTCAACCACTTTCTGAACCTAATGTTGTCGAGAAGGTTTACACAACAAATTGCTCTGATGAGAAGCCCCAGTTATCCTCTTTTGAAAACTCACAAGTAGGGGAAACAAATGTAATTGAAACTGAGAGGAAGGTGGATGTGAATCCACCAGAGTCTGATGTCATCGTCATCCAGGCAGCTATTAGGGGGTTATTGGCTCAGAGGGAACTGCTACAGCGTAAGAAAGTAGTGAAGTTGCAAGCTGCCATTCGTGGGCACTTGGTCCGGAGGCATGCTCTGGGAACCCTGCGTTGTGCTCAATCCATAATCAAAATGCAGGTCCTTGTGCGAACTCGTCGTGCTCAGCAGTCACATCTGGAAAATCATTTAATTCACAAGGATGGCGAAAAGGATTCCTCAGAAATTTTGGGAAATGAAAATCTGATGACCAAATCTAATGTGAATTACACTTCCATTGAGAAGCTGCTTAGCAATAGGTTTGCAAGTCAGCTGTTGGAATCAACACCAAAGAACAAACCTATCCATGTCAAGTGTGATCCTTCTAAAGCCGATTCTGCTTGGAAATGGTTGGAAAGGTGGATGTCCATATCATCAAAAGATATTGCAGATTGCAATGAAACTAGTTCTCTAACAGAACACTCAAAGGAAAGCAAGGATAGCGCTCCTGTGTTTCAATTTGAAACGGGTATTCCATCTGAACCCTTTCCCCCAGCCACTGACTCAATACCCACTGTTGAGGATTCACCTCTGCCATCTGAGGATGAAGAAAAGTCAATTACTTATGACGCTAATAACTTTGAGTTCCAAGCAAGCTGCTCCTCACCATCTATTGTAAAAGATGACTTGGAACAGGTTCCTGCTGAAGAAAAAACTGCATATGATGCCAAAGTTACCTTAGCTGATACCAATTCCTTCCAAAATGACAATTCAGCATCAGATGCAAGTGCCCCATCAGAGTTTTACTCTCTTCACAAGGGACCTGAAATTGCCCCATCATCAGAACACAGTTCTGTTCATGGGGAGCCTGAAATTACCCCACCACCAGAGCATACTTCTTTTTATCAGAAGCCTGAAATTGACAGTGAGCAGAACAAACGATCCGTGAAAAGATTTGCTTCAGAGCAACTAGAGTCTGAAGGAAAGAAAACTGTGAATGGATCAAAAAAGGTCAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTTGAAGAGCTGAGTTCAATAGCAAATTCAGGCAGGACAAACAATTTGTCCTACCAAGATTCAGCAGTTGAATCACAAGGAGACACCTCTTCTGTTGGCAATGACAGTGCATATAAATCGAAAGAGTTTGCATTTGAAAATCCTGCTCTTTATCTTTCTAGGCTTGCTGGTTCTGATTGTGGCACTGAACTCTCCATTTCTTCAACACTTGATTCACCTGACATATCAGAGCCTGGTATAATGGAAAATGAACGAGACGCCAAAGATTTGGTGGAAGGGATTGGTAATCTTGAGAACACAATAAACCGTGATGATGAGGCCAATGTTTCATCTGCCATCCCAGCTTCTAATGTAGCTACTTCTGTTTTGGATCAGTCGGAGGTTGTTGATGACATTAGTGGCAATTTGGGTCCCTCTGTGGTGGCTGTGGACTCTGGAGAGCCTGCTATTAGTAATATTGAGAAAAATGCATCTGATCTGCAGAGAGAACCAGCAGAGGCTGGTCTGCAAGATTTAAGATCATCTCCAGAAGCATCACCTAGAAGCCATTTGACTGTTCCGGAATCACAAGGAACCCCTTCAAGCCAAGTGTCTGTGCAAACTAAAGAGAACAAAGCCAACAAGAATAGATCTGGCAATAAACGTCGGAGCCTACCCTTAAGTAACAAATCTCCTTCTACTCCAAATCAAGATTCGGGATCAAGAGGCAGTAGGGAGCAACTACCTAAAGATCAGCAGAACGGAAAGAGGCGCACTTCCTTTGGCTCAGTAAAGCCTGATGACATTGATCAAGAACCTAGAGATAATAATACTAGCAACAATTCTGTTCCCCATTTCATGCAAGCTACAGAATCTGCTAAGGCCAAGATTAATGCAAATAACTCGCCAAGATCAAGCCCAGATGTGCATGAACGGGACGTTGAAGTTAAGAAGAGGCTTTCCTTACCTGGTGCCGCTGGTAGACAAGGATCTCCACGTATCCAGCGATCAACATCTAAGGCACAGCAGACTGCCAAAGGGAACAATGTAAATCCTCCTCAAGAGAGAAAATGGCTGAGGTGA 2484 0.434 MGKSTSCFKLITCGGDAADKDDYHQVSEIKESNDKRGWSFRKKSARHRVLSNTVIAEAPSSTNKESAECTNFNFQPLSEPNVVEKVYTTNCSDEKPQLSSFENSQVGETNVIETERKVDVNPPESDVIVIQAAIRGLLAQRELLQRKKVVKLQAAIRGHLVRRHALGTLRCAQSIIKMQVLVRTRRAQQSHLENHLIHKDGEKDSSEILGNENLMTKSNVNYTSIEKLLSNRFASQLLESTPKNKPIHVKCDPSKADSAWKWLERWMSISSKDIADCNETSSLTEHSKESKDSAPVFQFETGIPSEPFPPATDSIPTVEDSPLPSEDEEKSITYDANNFEFQASCSSPSIVKDDLEQVPAEEKTAYDAKVTLADTNSFQNDNSASDASAPSEFYSLHKGPEIAPSSEHSSVHGEPEITPPPEHTSFYQKPEIDSEQNKRSVKRFASEQLESEGKKTVNGSKKVSNPAFIAAQSKFEELSSIANSGRTNNLSYQDSAVESQGDTSSVGNDSAYKSKEFAFENPALYLSRLAGSDCGTELSISSTLDSPDISEPGIMENERDAKDLVEGIGNLENTINRDDEANVSSAIPASNVATSVLDQSEVVDDISGNLGPSVVAVDSGEPAISNIEKNASDLQREPAEAGLQDLRSSPEASPRSHLTVPESQGTPSSQVSVQTKENKANKNRSGNKRRSLPLSNKSPSTPNQDSGSRGSREQLPKDQQNGKRRTSFGSVKPDDIDQEPRDNNTSNNSVPHFMQATESAKAKINANNSPRSSPDVHERDVEVKKRLSLPGAAGRQGSPRIQRSTSKAQQTAKGNNVNPPQERKWLR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02375 827 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
Vian4g02375 827 MobiDBLite consensus disorder prediction 428 457 - -
Vian4g02375 827 MobiDBLite consensus disorder prediction 306 329 - -
Vian4g02375 827 Pfam IQ calmodulin-binding motif 127 143 IPR000048 GO:0005515
Vian4g02375 827 Pfam IQ calmodulin-binding motif 146 164 IPR000048 GO:0005515
Vian4g02375 827 MobiDBLite consensus disorder prediction 485 509 - -
Vian4g02375 827 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Vian4g02375 827 MobiDBLite consensus disorder prediction 605 827 - -
Vian4g02375 827 MobiDBLite consensus disorder prediction 377 460 - -
Vian4g02375 827 SMART iq_5 122 144 IPR000048 GO:0005515
Vian4g02375 827 SMART iq_5 145 166 IPR000048 GO:0005515
Vian4g02375 827 Gene3D - 125 164 - -
Vian4g02375 827 MobiDBLite consensus disorder prediction 742 772 - -
Vian4g02375 827 PANTHER IQ-DOMAIN 5-RELATED 1 797 - -
Vian4g02375 827 MobiDBLite consensus disorder prediction 649 680 - -
Vian4g02375 827 Pfam Protein of unknown function (DUF4005) 733 809 IPR025064 -
Vian4g02375 827 MobiDBLite consensus disorder prediction 687 727 - -
Vian4g02375 827 MobiDBLite consensus disorder prediction 798 818 - -
Vian4g02375 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 193 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02375 113 827 IQD Protein Family AT1G19870 35.319 5.87e-102 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02375 - - var:108343123 1620.91