Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02355 ATGGCTGATTCTGCCTCAGCCTCCTCTTCCACCAGAATGTGGTGCTCCGTCCCGGAACGCGTTCAGCTGCATGCGGCCATGTTGGCCCTGCAGTTTGGCTACGCCGGATTCCACGTCGTTTCTCGAGCTGCCCTTAACATGGGCATTAGCAAACTTGTTTTCCCAGTCTACCGCAACGTTATTGCCTTATTCCTGCTCCTTCCTTTTGCCTACTTCTTGGAAAAGAAGGAGAGGCCTGCCATTACTTTAAACTTCCTCTCACAGTTCTTTCTTCTGGCGCTTGTCGGGATTACTGCGAACCAAGGTTTCTACTTGCTTGGTTTGGACAACACATCACCAACGTTTGCATCAGCGATACAAAACTCTGTCCCAGCCATTACATTTCTGATGGCAGCCATATTCAGGATAGAGCAAGTTCGGGTGAATCGAAAGGATGGGATAGCGAAGGTTGCGGGAACGGTATTCTGTGTGGCTGGGGCATCGGTGATTACCCTATACAAGGGTCCAACAATATATAGCCCAACTCCACCACTGAACGCTAGCCCAGTAATTGACTTTGGCTCACTCTCGCTGGGAGATGCAAAGGGAAAGAACTGGACCCTCGGCTGCCTCTATCTCATAGGACACTGCTTGTCCTGGTCTGGTTGGCTTGTGTTGCAAGCACCTGTAATCAAGAAGTACCCTGCCCGCCTCTCTCTCACTTCCTATACATGTTTCTTTGGCCTCATACAATTCTTCGTCATTGCTCTCATCGTTGAAAGAGATGCTCAGGCTTGGATTTTCCAATCTGGTGGAGAAGTTTTCACCATCTTCTATGCGGGAGTGGTGGCATCTGGAATTGCCTTCGCTGTTCAGACATGGTGCGTCGACAGAGGTGGCCCTGTGTTCGTTGCAGTGTATCAACCTGTTCAAACTCTCGTTGTCGCTATTATGGCTTCCCTTGCTTTAGGCGAAGAGTTCTACTTGGGAGGGATCATAGGAGCAGTGTTGATCGTTGTGGGACTGTACTTTGTGTTGTGGGGCAAAAACGAAGAGAGAAAGTTTGCAAGGGAACAGGCTGCGATCACGTCCACCCCAGAGCACAGTGGCATCAGATCCGCAAGCCATGCCAAAACATCACTCACTCAGCCTCTTCTCCTCCCTTCATCTACGGAGAACGTGTGA 1164 0.5017 MADSASASSSTRMWCSVPERVQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALFLLLPFAYFLEKKERPAITLNFLSQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAIFRIEQVRVNRKDGIAKVAGTVFCVAGASVITLYKGPTIYSPTPPLNASPVIDFGSLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVIKKYPARLSLTSYTCFFGLIQFFVIALIVERDAQAWIFQSGGEVFTIFYAGVVASGIAFAVQTWCVDRGGPVFVAVYQPVQTLVVAIMASLALGEEFYLGGIIGAVLIVVGLYFVLWGKNEERKFAREQAAITSTPEHSGIRSASHAKTSLTQPLLLPSSTENV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02355 387 PANTHER WAT1-RELATED PROTEIN 25 351 IPR030184 GO:0016020|GO:0022857
Vian4g02355 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 167 - -
Vian4g02355 387 Pfam EamA-like transporter family 201 339 IPR000620 GO:0016020
Vian4g02355 387 Pfam EamA-like transporter family 27 164 IPR000620 GO:0016020
Vian4g02355 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02355 Vian-Chr4 40259762 40262403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02355 1 387 Nodulin-like Gene Family AT1G75500 74.555 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02355 - - gmx:100786714 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02355 4 40259762 40262403 Vian4g02355 4 40259762 40262403 ECH