Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02342 ATGGCATCATCAAGTGGAAACTCGTCTATTTGCACCAAGATTCAAAGCTCGAGCTCCGAAGGAGATTTGCAGGTTCTGACGATGGACGAGAGAAAGAACAAGAGAAAACAATCGAATCGTGAATCTGCGAGAAGATCTCGGATGCGAAAGCGTGACCACTTGGAAGACCTCAGGAAGCAAGTGTCAGAGTTCACAAAGGAGAACAGGGAAATCATGGCGACCATAGACATGACCACACAACACTATCTGAAAACCGAGGCAGAAAATTGCGTTCTGAGGGCCCAGATGGGTGAGCTTAACCAGCGGCTCCAATCGCTGAACGACATCATCGTTGACATCATCAACACAACCACCTCCTACGAAAGGGACTGTTATCTAACAAGTTTACAAAGTTTTAGCAACACTGTCTGTCTCAACCAACCTGTTTTTCAGTGGTGA 438 0.4635 MASSSGNSSICTKIQSSSSEGDLQVLTMDERKNKRKQSNRESARRSRMRKRDHLEDLRKQVSEFTKENREIMATIDMTTQHYLKTEAENCVLRAQMGELNQRLQSLNDIIVDIINTTTSYERDCYLTSLQSFSNTVCLNQPVFQW 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02342 145 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Vian4g02342 145 Gene3D - 29 85 - -
Vian4g02342 145 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Vian4g02342 145 Coils Coil 40 74 - -
Vian4g02342 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 76 IPR004827 GO:0003700|GO:0006355
Vian4g02342 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Vian4g02342 145 MobiDBLite consensus disorder prediction 1 61 - -
Vian4g02342 145 Pfam bZIP transcription factor 31 84 IPR004827 GO:0003700|GO:0006355
Vian4g02342 145 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Vian4g02342 145 FunFam BZIP transcription factor 29 80 - -
Vian4g02342 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 14 123 - -
Vian4g02342 145 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02342 Vian-Chr4 40135693 40136130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02342 28 110 bZIP Transcription Factor Family AT4G34590 65.060 4.38e-31 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian4g02342 bZIP_1 2.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02342 K25786 - gmx:778188 200.29