Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02338 ATGGAAGCCCCTGATTGTATGTATCGTGGTGAAGCATTGAGCATTCCTCCAAGCGCTCCTACCCCAAAACATTCTCTCTATTTGTCCAATCTCGACGACCAAAACTTCCTAAGGTTTTCCATCAAATACTTGTACCTCTTCAACAAGTCCTTGAACTTGGATGTGTTGAAGTCTTCTCTGGCCAGAGTTCTGGTGGATTATTACCCCTTGGCCGGTCGCTTGAGGACCGTCGATCATGAGAAGCTCGAGGTCGATTGCAATGGACAGGGTGCTCTCTTTGCCGAGGCTTTCACTCACACCACTCTTCATCAACTTCTCGAATCTTCCAAGACTCCAAACAAATCTTGGAAGAAGTTCTTGTATAAGGTCGAAGCTCACACTTTCGTCGATGTTCCTCCTCTCGTAGTCCAGGTAACGAGGCTGGGTTGCGGGGGAATGATCCTGTGCACGGCGATCAACCACTGCGTATGCGACGGCATAGGCACGTCTCAGTTTCTACACGCTTGGGCACAGCTCACGAAAAAGCCAGAAGCGGAATTGACGATCATGCCCTTCCACTGGCGCCACGTGCTGAAACCCAGACACCCTGCGCAGGTAAAGTTCCGTCACGCGGGCTACACCGCACCAAACCCAACCCCTCAAGTGGACCTTATAAAGTTCATACAGTCACAGCCCTTGGTAGCCACATCCTTCACCCTCACCCCCTCCCACGTCCTTCGCCTCAAGAAAGAGTGCGTCCCCTCCCTCAAGTGCACCTCCTTCGAAACCGTTGCGGCCCACACCTGGCGCTCTTGGATTCGCTCGCTGGGCCAATCCCTACCGTCCAAACTCACTGTGAAGCTCCTTTTCTCGGTCAACGTTAGAAGAACAGTTGACCTTCCGCAGGGGTATTACGGGAACGGATTCTTGCTAGCGTGCGCTGAGAGCAGCGTGGAGGACTTAGTGGACGGTAACCTGCGCCACGGAGTGAAACTTGTGCAGGAAGCTAAGGCAAGGTTGAAAGAGGAGGAGTACGTAAGGTCAATGGTTGACCTGTTAGAGGACAAAACTGTAAAAACGGATCTTTCGACGAGTTTAGTTATTTCGCAGTGGTCTAGACTGGGGTTGGAAGAGGTGGATTTTGGGGAAGGGAAACCTTTGCATATGGGTCCTTTGACCAGTGATATTTACTGCTTGTTCTTACCCGTCGCCGGTGACGCTAATGCCGTCAGAGTGCTGCTGTCTGTCCCCGCGACCATGGTGGAACGTTTTCAGTATCACATGATGAGACAAATAATTAATAACAACCTAGTTTTACCTGATGGCTTGGAGGAGAAGTTGATTGGTGATGGTGAAAGACAGGTTGATGTGCATCGTATCCTCCTCATTTTCTACAATATTGTTGGTCCACAATGTCCGTGA 1401 0.5061 MEAPDCMYRGEALSIPPSAPTPKHSLYLSNLDDQNFLRFSIKYLYLFNKSLNLDVLKSSLARVLVDYYPLAGRLRTVDHEKLEVDCNGQGALFAEAFTHTTLHQLLESSKTPNKSWKKFLYKVEAHTFVDVPPLVVQVTRLGCGGMILCTAINHCVCDGIGTSQFLHAWAQLTKKPEAELTIMPFHWRHVLKPRHPAQVKFRHAGYTAPNPTPQVDLIKFIQSQPLVATSFTLTPSHVLRLKKECVPSLKCTSFETVAAHTWRSWIRSLGQSLPSKLTVKLLFSVNVRRTVDLPQGYYGNGFLLACAESSVEDLVDGNLRHGVKLVQEAKARLKEEEYVRSMVDLLEDKTVKTDLSTSLVISQWSRLGLEEVDFGEGKPLHMGPLTSDIYCLFLPVAGDANAVRVLLSVPATMVERFQYHMMRQIINNNLVLPDGLEEKLIGDGERQVDVHRILLIFYNIVGPQCP 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02338 466 Gene3D - 11 208 IPR023213 -
Vian4g02338 466 SUPERFAMILY CoA-dependent acyltransferases 39 185 - -
Vian4g02338 466 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 418 - -
Vian4g02338 466 Pfam Transferase family 15 421 - -
Vian4g02338 466 Gene3D - 220 421 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02338 Vian-Chr4 40112057 40114658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02338 17 384 Monolignol Biosynthesis Gene Families AT5G48930 30.886 6.39e-46 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02338 - - var:108341288 862.833