Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02335 ATGCTTTCCAAATTGGTAGAGGAGCATCCTTACCTTTGTTCCCATGTTGCTCTCTTGTGTTTTCTTTTATTCTGTCAAAAAGCATGGACACTTTGGTGCACAAACTACCCCTCTCTGCCAAACATTCCTCCGGGAAATCGAGGATTACCCTTTCTCGGAGAGACACTTCAGTTCATGGCTGCCATCAACAACACCAAAGGAGTCTATGAATTTGTCCAAGCTCGCCGACTCCGGTATGGAAAATGCTTCAAGACGAAGTTATTCGGGGAAACGCACGTTTTCATATCGGGCACGGAGTCTGCAAAAGTGATTCTAAACAACGAGGAGAAATTCTCAAAGAAGTATATGAAGTCAATCGCTGAGCTTGTTGGACGCGATAGCTTGCTCTGCGCTACACACCAACATCACAAACTTATTCGCGGTTCTCTGTTTTCTCTATTCTCCACGCAATCTTTGTCTTCCTTCGTTAAACTCTTTGATTCACTTCTTCTTGAAGCTACAACTAGTTGGAAATCTGGATCTGTTCTCGTTATTCAAGATGAAACACTAAAGCTAGCGTGTAAGGCGATGTGCAAGATGCTAATAAGCATCGAAAATGGCGACGAATTAGAGAGCATGCAAAATGAGGTTTCTCGTTTGGGTGAAGCAATGTTAGCCTTACCCGTGAGATTACCCTGGACCAGATTCTACAAAGGCCTTCAGGCTCGAAAAAGGATAATGGATATATTGGAGAAGACAATAAGTGAAAGAAGAAGTGGAACTGCAACTAGCCATGTCGATTTCCTTCAACAACTTTTGGATGATAAATTACACGACGATGGAATCCCAATGCTAACAGAGAGAGAGATCAAAGACAATATCTTAACTATGATAATTGCTGGACAGGACACGATAGCAAATGCGATGACATGGATGATCAAATTTGTGGATGAGAATCCGCTTGTTTTTAATACCCTTATGAAGGAGCAACTTGAGATTGAGAAGAATGGTTCGAGAAATTCATATCTTACAGTAGAGGCCCTTAACGAGATGCCATATGCTTCTAAGGTTGTAAAAGAAGCATTAAGAAAGGCATCTGTGGTGCAGTGGTTGCCTAGAGTAGCACTCGAGGACTGTGTTATTGAAGGATATAAAATCAATAAGGGGTGGAACATTAACGTCGATGCTAGATCGATACACCATGATCCAACCGTGCACAATGATCCGGGTGTGTTCGATCCTTCAAGATTCCCTGCAGAGTCAACACCATACAGCTTCTTAGCTTTTGGGATGGGAGGAAGGGCGTGTCTAGGGAAGAACATGGCTAAAGCCATGATGTTGGTGTTTCTCCATCGTTTCATCACCAATTGCAAGTGGAAGGTGATTGACTCTGACTCAAGTATTCAGAAAGGGGCACTTTTTACAAAACTCAAGAGCGGATATCCTGTCCGTTTGATCTCGACCAAGGATGCCCAAAACCAAACCATCTGA 1470 0.4286 MLSKLVEEHPYLCSHVALLCFLLFCQKAWTLWCTNYPSLPNIPPGNRGLPFLGETLQFMAAINNTKGVYEFVQARRLRYGKCFKTKLFGETHVFISGTESAKVILNNEEKFSKKYMKSIAELVGRDSLLCATHQHHKLIRGSLFSLFSTQSLSSFVKLFDSLLLEATTSWKSGSVLVIQDETLKLACKAMCKMLISIENGDELESMQNEVSRLGEAMLALPVRLPWTRFYKGLQARKRIMDILEKTISERRSGTATSHVDFLQQLLDDKLHDDGIPMLTEREIKDNILTMIIAGQDTIANAMTWMIKFVDENPLVFNTLMKEQLEIEKNGSRNSYLTVEALNEMPYASKVVKEALRKASVVQWLPRVALEDCVIEGYKINKGWNINVDARSIHHDPTVHNDPGVFDPSRFPAESTPYSFLAFGMGGRACLGKNMAKAMMLVFLHRFITNCKWKVIDSDSSIQKGALFTKLKSGYPVRLISTKDAQNQTI 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02335 489 Pfam Cytochrome P450 43 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02335 489 CDD CYP90-like 75 478 - -
Vian4g02335 489 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02335 489 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02335 489 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02335 489 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02335 489 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02335 489 Gene3D Cytochrome P450 35 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02335 489 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02335 489 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02335 489 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02335 489 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02335 489 SUPERFAMILY Cytochrome P450 37 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02335 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Vian4g02335 489 PANTHER CYTOCHROME P450 26 39 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02335 Vian-Chr4 40088818 40091586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02335 38 452 Cytochrome P450 AT1G19630 56.802 7.26e-174 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02335 - - lang:109327951 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02335 4 40088818 40091586 Vian4g02335 4 40088818 40091586 ECH