Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02321 ATGGGGTGGACACGAGAAGAGAATAGACGTTTTGAGGATGCTCTTGCGGTTCATGGCCCTGACGACCCAAATCGGTGGCAACATGTGGCCAACGCCGTGGGGGGAAAATCTGTAGAAGAGGTGAAAATGCACTATGAGATTCTCCAGGAAGATGTCATTCGAATTGAGCATGACCAAATTCCACTACCCAGGTACAGAGGTGCCGGCATCAATGGAAGACAAATTGACAATGAACAAAGGAGGAAATCACTATTGTTGCAAACACCAAAACTCGTGAAGAGTTTTGTGGAAGTTTCATTGGATCAGGGATAA 312 0.4615 MGWTREENRRFEDALAVHGPDDPNRWQHVANAVGGKSVEEVKMHYEILQEDVIRIEHDQIPLPRYRGAGINGRQIDNEQRRKSLLLQTPKLVKSFVEVSLDQG 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02321 103 Gene3D - 2 50 - -
Vian4g02321 103 SMART sant 3 51 IPR001005 -
Vian4g02321 103 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 75 IPR044636 GO:0003700
Vian4g02321 103 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Vian4g02321 103 FunFam Transcription factor SRM1 1 62 - -
Vian4g02321 103 CDD SANT 3 45 IPR001005 -
Vian4g02321 103 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Vian4g02321 103 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Vian4g02321 103 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Vian4g02321 103 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02321 Vian-Chr4 40008194 40008596 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian4g02321 Myb_DNA-binding 1.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02321 - - gmx:100789698 150.984