Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02307 ATGTCCAAACGATTCAAAATCAAATTCAATGTTCCTTCCTTTCAGATATGTCGCTCAAAAGACCTTTCTTCTTTCCCAGGAAACCCCGTTCCTGCCATATACCGTCTCTCTCCCGTTAACCACAACGCACGTCATCCCAACCTTCCTTCTCCCCAATCGTCCAAGATAACGTCGTCCGTTTCGCAGGGGTGCAAAATGTGCCGTGACAAGGAGCCGTACAAAGCGAAATCCAGAAGCCGGAAAGGCACGTCGAGCGTTCCGTCGAGGCGAAGCGATTTTCTGATCGACAACGTCGAGGAAGAGGAAAGCGAGACTCTGATTTCTTGCTTGACAAGTTTCTCCGACGAGATTTGTCACGACGAGGCGAGGGACTTGAGAAACAGTAGGCATAGAAGGAAGGCGAGCAGCGTGAAGAAGGTTCAGAGCGTGAGGTTTCGGAGCTCTTCGGAGAATCGAGGAGGAGCGGGAACGACGGAGAAGGTGAAGAAAATGTCGACGACGGTGACGCGGAGCAATGTTGAGGGGAAGGTGAGGGAGAGCTTTGCGGTGGTGAAGAAGTCGAAGGATCCTTACGAAGACTTCAAGAAATCGATGATGGAGATGATAACGGAGATGGAGATGTCTGAGGCGGAAGACCTGGAACAGCTTTTGCAGTGTTTCTTGGCTTTGAACTCGCGGAGTTACCATGCAGTCATCGTTAGAGTTTTCATGGAGATTTGGCAACAAATGTTCGTGTGGAACCCAAAGTCCGTGAAAAATCTCACGGACGTTAAAACTGATACGGAAAAGTAA 792 0.4949 MSKRFKIKFNVPSFQICRSKDLSSFPGNPVPAIYRLSPVNHNARHPNLPSPQSSKITSSVSQGCKMCRDKEPYKAKSRSRKGTSSVPSRRSDFLIDNVEEEESETLISCLTSFSDEICHDEARDLRNSRHRRKASSVKKVQSVRFRSSSENRGGAGTTEKVKKMSTTVTRSNVEGKVRESFAVVKKSKDPYEDFKKSMMEMITEMEMSEAEDLEQLLQCFLALNSRSYHAVIVRVFMEIWQQMFVWNPKSVKNLTDVKTDTEK 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02307 263 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 81 244 IPR038933 GO:0045892
Vian4g02307 263 ProSiteProfiles OVATE domain profile. 183 242 IPR006458 -
Vian4g02307 263 MobiDBLite consensus disorder prediction 43 64 - -
Vian4g02307 263 Pfam Transcriptional repressor, ovate 187 244 IPR006458 -
Vian4g02307 263 MobiDBLite consensus disorder prediction 126 169 - -
Vian4g02307 263 NCBIfam uncharacterized plant-specific domain TIGR01568 181 243 IPR006458 -
Vian4g02307 263 MobiDBLite consensus disorder prediction 41 97 - -
Vian4g02307 263 MobiDBLite consensus disorder prediction 140 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02307 Vian-Chr4 39915664 39916455 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vian4g02307 Ovate 5.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02307 - - gmx:102662518 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02307 4 39915664 39916455 Vian4g02307 4 39915664 39916455 ECH