Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02288 ATGGACATGGAAAATCCATTCTCCGTGTTAACAGGGTTATTTACCATCTACCTCGGCCTCCTCTTATTTCTGTTTCTTCTTTCATCCATGTTGAGAAGGCGCAGAACCGGCACAGGTGAAACTAGAGAAGCACCGCCTGAAGTAAGTGGTGCCTGGCCATTGATTGGGCATCTTCACCTTCTAAGTGGGTCAAAAGCACCTCACATCACGTTGGGAAACATGGCAGACAAATATGGACCCATCTTCACCTTGCGCCTTGGTGTTCACAGAAACCTTATTGTGAGCAATTGGGAAATGGCCCAACAGTGTTTTACCGTTAACGACAAAGCGTTTGCTAACCGTCCTAAAACTTTAGCCTTTGAAGTATTGGGCTACAACTTTTCCATGGTGGGGTTCAGCCCCTACTGTTCTTATTGGCGTCACATACGAAAGATTCTCACGCAGGAGCTCCTCTCCACGCAAAGGGTTGACGAGCTCAAGCACGTGATGGAATCAGAGCTGAAGGTAACTATGAAAGAAAATTACGATATTTGGCAAAAGAGGAAAATTAATGGTTCCGAAAAAGCAACAACTGAGATGAAGAGATGGTTTGGGGACATAACGTTAAACATCGTGTTCAGAGCGATGGTAGGAAAACGTTTTGTTGGTGAAAATGATAGTGAGAACGAACGGATCCAAAAGATACTGAATGACTACATTCATCTGGCTGGCTCATTCACTGTGTCTGATGCCTTGCCATATTTGAGATGGTTGGATTTGGATGGAGAAGAACAGAAAATGAAGAAGACGATAAAAGAGTTAGATGGGTTGGCTCAAGGTTGGCTGGAACAACACAAAAGCAACAGAAAAAGTGATTCGGGTAACGGGGATTTCATGGACGTGCTTCTTAGGCTTGTTGAGGAGGGTGAAGAGTTTGAAGGTCGTGACGCCGACATCACAATCAAAGCGACAGTCCTGGGCTTAATATTGGCTGCGACAGACACTAGTACGGGAACATTGACTTGGGCTCTGGCGTTACTGGTGAACAACCCTGAAATCTTAAACAAGGCAACTGAAGAATTGGACAGAGAAATTGGAATGGGGAAAATGGTAGATATATCAGATTTGAAGAAGTTAGAGTACATGCAGTGTATCATAACGGAAAGCCTGCGTTTGTATCCACCTGCACCCCTTAATTTGATACACGAGTCTATGGAAGACTGCAGCGTGGGTGGATATCACGTGGCAAAAGGCACACGTCTGTTGACTAATATTTCAAAACTTCAACGAGATCCCTTCATATATCCTCATCCATCGGAGTTTCGTCCAGAGAGATTCTTAACAACACACAAGGACGTCGACATGAAGGGTCAACATTTTGAACTCATTCCATTTGGTGCCGGTAGAAGAATGTGTCCTGGTTTGTATTTCGGTTTTCAAGTAATGCAGTTAACACTTGCAACTCTGTTGCATCTATTTCACATCGCAACTCCTGATGGAAAACCTGTCGACATGCTCGAACGAGTTGGACTAACCAACATCAAGGCTTCTCCTCTTCAACTCATTCTTACACCACGTCTCTCCTCCCATATTTATCATCAAATTTAA 1587 0.4398 MDMENPFSVLTGLFTIYLGLLLFLFLLSSMLRRRRTGTGETREAPPEVSGAWPLIGHLHLLSGSKAPHITLGNMADKYGPIFTLRLGVHRNLIVSNWEMAQQCFTVNDKAFANRPKTLAFEVLGYNFSMVGFSPYCSYWRHIRKILTQELLSTQRVDELKHVMESELKVTMKENYDIWQKRKINGSEKATTEMKRWFGDITLNIVFRAMVGKRFVGENDSENERIQKILNDYIHLAGSFTVSDALPYLRWLDLDGEEQKMKKTIKELDGLAQGWLEQHKSNRKSDSGNGDFMDVLLRLVEEGEEFEGRDADITIKATVLGLILAATDTSTGTLTWALALLVNNPEILNKATEELDREIGMGKMVDISDLKKLEYMQCIITESLRLYPPAPLNLIHESMEDCSVGGYHVAKGTRLLTNISKLQRDPFIYPHPSEFRPERFLTTHKDVDMKGQHFELIPFGAGRRMCPGLYFGFQVMQLTLATLLHLFHIATPDGKPVDMLERVGLTNIKASPLQLILTPRLSSHIYHQI 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02288 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Vian4g02288 528 PANTHER CYTOCHROME P450 82C3-RELATED 22 525 - -
Vian4g02288 528 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02288 528 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02288 528 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02288 528 Pfam Cytochrome P450 48 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02288 528 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02288 528 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02288 528 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02288 528 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02288 528 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02288 528 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02288 528 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02288 528 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02288 528 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02288 528 FunFam Cytochrome P450 82C4 35 517 - -
Vian4g02288 528 SUPERFAMILY Cytochrome P450 46 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02288 528 CDD CYP82 79 519 - -
Vian4g02288 528 Gene3D Cytochrome P450 30 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02288 Vian-Chr4 39708451 39710432 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02288 11 525 Cytochrome P450 AT4G31940 45.265 9.31e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02288 - - gmx:100778017 738.028