Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02287 ATGTACCACGAAAACCCTCGCTCCAACTACACAGTTCCACTTACAATCTGCCTGTTGTTATTTCTCTTTATTCTTTTGTCCATTTCCAGAAAGCTCAAAAACCACAGTGCTGCAACAAGAAAAGCACCGCCAGAAGCAAGTGGCGCATGGCCTTTGATTGGTCACCTCCACCTCTTAGGGGGGTCCAAACCGCCACATGTTACGTTGGGCCACATGGCGGACAAATACGGCCCCATCTTCTCCTTACGCCTGGGAGCTCACAAAACGCTGGTTGTGAGCGATTGGGAAATGGCCAAAGAGTGCTTTACCGTCAACGACAGAACGTTCGCTAACCGTCCAAAATCCATGACCTTTGAAGTGTTGGGCTACAACTCCTCCATGATTGGGTTCATCCCCTACGGATCTTACTGGCGCCAGATGCGCAAAATCGCCACGCTTGAGCTCCTCTCTTCTCGCCGCATAGACACGCTGAAGCACGTGATGGAAGCCGAAGTGAAAGCAGCGATGAGAGAGAGTTATAATTTGTGGTTGAAGAAGAAAAACGGCTTTTCCGAAATGAAGAGGTGGTTTGGAAACATAGCGTTGAACATTATGTTCCAAACGGTGGTAGGAAAACGTTTTGTAAGTGACGGCGGCGTGAACGAAGAGAACGAACGACTCCGAAAGGTATTCAGGGATTTGTTTGATCTGGGCGGTTCATTCGCTGTGTCTGACTGTATGCCCTATTTGAGATGGTTAGATTTGGATGGTATAGAGAAGAAAATGAAGAGAACGGCGAAAGAGATAGATGGGTTTGCTCAGATTTGGCTTGAAGAACACAAACGCAACCGGGATTGTAGTTCAGGTGAACGGAAACATAGCCATGACCTGATGGACGTGCTTCTTGGACTTGTTGAAAAGGGTGAAGAGTTTGATGGTCATGACTCTGACACCTCAATCAAAGCTCTGTGCATGACTTTAATTATGGCTGGTTCAGATAGCACAGCAGGAACATTGGCATGGGCTCTGTCTTTACTTCTCAATAATCGTGAAATTCTAAAAAAGGCCACTGACGAATTAGATGCAGAAATTGGGAGTAAAAGGATGGTAGATGTTTCAGATTTGAAGAAACTAAAGTATCTTGAATCTATTATCAAGGAAACACTACGTTTATACCCAGCTGGACCACTTAGTCTGGTACACGAGTCCATGGAAAATTGCACAGTGGGTGGATATGATGTAGCATCCGGCACACGTCTTTTGACTAATCTTTCAAAACTTCAGAGAGATCCATCTTTATATCCAAATCCCCTTGAATTTTGTCCAGAAAGATTCTTAACAACCCACAAGGAAGTGGACGTAAAGGGTCAACATTTTGAGTTGATTCCATTCGGTGCAGGTAGAAGAATATGTCCTGGGATATCTTTCAGTCTCCAAGCGACGCAACTCACACTTGCTACCTTATTGCATGGGTTTGATATTGTAACTATTGATGGAGGACCTGTTGATATGGCTGAACAGATTGGCTTTACCAGCATTAGAGCTTCTCCCCTCCAAGTCATTCTTTCTCCGCGTCTTACTTCTCATATTTATGATCAAATCTAA 1584 0.447 MYHENPRSNYTVPLTICLLLFLFILLSISRKLKNHSAATRKAPPEASGAWPLIGHLHLLGGSKPPHVTLGHMADKYGPIFSLRLGAHKTLVVSDWEMAKECFTVNDRTFANRPKSMTFEVLGYNSSMIGFIPYGSYWRQMRKIATLELLSSRRIDTLKHVMEAEVKAAMRESYNLWLKKKNGFSEMKRWFGNIALNIMFQTVVGKRFVSDGGVNEENERLRKVFRDLFDLGGSFAVSDCMPYLRWLDLDGIEKKMKRTAKEIDGFAQIWLEEHKRNRDCSSGERKHSHDLMDVLLGLVEKGEEFDGHDSDTSIKALCMTLIMAGSDSTAGTLAWALSLLLNNREILKKATDELDAEIGSKRMVDVSDLKKLKYLESIIKETLRLYPAGPLSLVHESMENCTVGGYDVASGTRLLTNLSKLQRDPSLYPNPLEFCPERFLTTHKEVDVKGQHFELIPFGAGRRICPGISFSLQATQLTLATLLHGFDIVTIDGGPVDMAEQIGFTSIRASPLQVILSPRLTSHIYDQI 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02287 527 FunFam Cytochrome P450 82C4 33 516 - -
Vian4g02287 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Vian4g02287 527 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02287 527 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02287 527 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02287 527 CDD CYP82 77 518 - -
Vian4g02287 527 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02287 527 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02287 527 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02287 527 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02287 527 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02287 527 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02287 527 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02287 527 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02287 527 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02287 527 PANTHER CYTOCHROME P450 82C3-RELATED 20 524 - -
Vian4g02287 527 Gene3D Cytochrome P450 27 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02287 527 SUPERFAMILY Cytochrome P450 48 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02287 527 Pfam Cytochrome P450 46 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02287 Vian-Chr4 39703257 39705022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02287 14 524 Cytochrome P450 AT4G31970 47.793 1.02e-170 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02287 - - gmx:100787630 758.444