Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02284 ATGGAAGCAGCAGCGCTTGCTGGAGTAGCTGTCTTTCTATTACTTAGTTACTTCATCAAATGGGCTACAGCAGGTTCTGCTCGCAAGAAGCCACCGGAAGCAGCCGGTGGCTGGCCTTTAATCGGCCACCTTCGCCTCTTTGGTCGCTCCGCCTGTCAGCCTCTATACGAAACGCTAGGAGGCTTAGCAGACAAGTATGGCCCAATATTCAGCATCCGAATCGGTGTGCATCAGGCGGTAGTGGTGAGCTCTTGGGAGTTAGCGAAGGAGTGTTTTACCACTCTGGACGTTGTTGTCTCATCTCGTCCCAAATTCAGCGCCGCCAAAATCTTGACATACGACTATGCTAGTTTTGCGTTTTCCCCTTACGGAGAATTCTGGCGCGACATGCATAAGATTACGGTTTCGGAGCTATTTTCTACCCGACGTGCTGAACAGCTTCGAGGAATTAGATATTCGGAGGTGCAGAGTTCGTTGAAAGAACTATACGGAACGTGGGTGGAGAAAAAGGGTGATTTGTTGGTGGAGATGAAGGAGTGGTTCGGGAACATGAATCTGAACGTGATTCTGAGGACGGTTGCGGGAAAGCGATACTGTGTGGGGAATGGAGATGAGGAACGGATGAGGGTTCGGAGGGTACTGAGAGAATTCTTTAATTTGATGGGGGTGGTTGTGATTGGGGATGCGATTCCATTTCTTGGTTGGCTTGATTTGGGAGGTGAAGTGAAGGAGATGAAGAAAACGGCTGTAGAAATGGATAGCTTCTTTTCTGAATGGTTAGAAGAACATCGCCAACGAAGAGACTCAGATGGGAAGAAAAGAGAGGAAGACTTCATTGATGTGTTGCTGTCTGCTCTTGACGGGGTCGACCTTGCTGGTCACGATGCCGACACTGTCATTAAAGCCACATGTCTGACATTAATAGCTGCAGCAACGGATACTACAACAGTTACTATGACTTGGGCATTATCGGTATTGTTGAATAATCGCGATGCCTTGAAGAAAGTTCAAGATGAATTGGATGAGCATGTGGGGATGGAAAAAGCGGTGAATGAATCTGACATAAACAAATTAGTTTACCTTCAAGCTGTCGTTAAAGAGTCAATGAGATTGTATGCAGCTGCACCACTACCTGGTCCGCGTGAATTCACAAGCGATTGTACTTTAGGTGGCTACCATATCCAAGCAGGTACGAGATTGATTTTGAACATTTGGAAGATGCAGAGAGATCCACGTGTATGGGAAAATCCATTGAAGTTTGAGCCAGAAAGGTTCCTCACAAGCCACAAGGGTGTGGATGTGAAGGGTCAACATTTTGAGCTACTTCCCTTTGGTGGCGGAAGAAGGTCGTGCCCTGGCATGTCATTTGCCCTTCAAATGACACACTTAGCTTTAGCAGCTTTTTTGCAAGCATTTAAGGTCACAACACTGAACAATGAACCAGTTGACATGAGTCCCGTATTTGGACTCACACTCATCAAAGCCACCCCGCTTGAGGTTTTAATCCAACCTCGTTTACCACATCAACGTCTCCTTAATAATGTATACTAA 1551 0.4655 MEAAALAGVAVFLLLSYFIKWATAGSARKKPPEAAGGWPLIGHLRLFGRSACQPLYETLGGLADKYGPIFSIRIGVHQAVVVSSWELAKECFTTLDVVVSSRPKFSAAKILTYDYASFAFSPYGEFWRDMHKITVSELFSTRRAEQLRGIRYSEVQSSLKELYGTWVEKKGDLLVEMKEWFGNMNLNVILRTVAGKRYCVGNGDEERMRVRRVLREFFNLMGVVVIGDAIPFLGWLDLGGEVKEMKKTAVEMDSFFSEWLEEHRQRRDSDGKKREEDFIDVLLSALDGVDLAGHDADTVIKATCLTLIAAATDTTTVTMTWALSVLLNNRDALKKVQDELDEHVGMEKAVNESDINKLVYLQAVVKESMRLYAAAPLPGPREFTSDCTLGGYHIQAGTRLILNIWKMQRDPRVWENPLKFEPERFLTSHKGVDVKGQHFELLPFGGGRRSCPGMSFALQMTHLALAAFLQAFKVTTLNNEPVDMSPVFGLTLIKATPLEVLIQPRLPHQRLLNNVY 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02284 516 CDD CYP82 67 505 - -
Vian4g02284 516 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 SUPERFAMILY Cytochrome P450 37 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 Gene3D Cytochrome P450 25 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 PANTHER CYTOCHROME P450 82C3-RELATED 11 508 - -
Vian4g02284 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Vian4g02284 516 Pfam Cytochrome P450 36 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02284 516 FunFam Cytochrome P450 82C4 22 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02284 Vian-Chr4 39669339 39671069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02284 32 509 Cytochrome P450 AT4G31940 50.204 1.11e-177 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02284 - - gmx:100779080 786.563