Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02283 ATGGATCTGCATGAGGCAGCCATTGAAGAATGCATCAGGGGTGAGGATAAGGATAAGTTTAAGCAGCTACATTTTGGAGTGCATACACTTCAACCATTCTTTACAATAAACACTTCTGTTTGGACCGGATACTACTCTTTTGACTATTTAATGCAATTGTACATCATGAGCTCGTACTCAAAACCACTTTTAAATTGGAACAACGGTACACCAATCTCTACAATCCCTATGTGCACCATTCCTCACACAGTAATGCCAACCTTTGCACCCTTGCCAGAGCCAGATCTCTCCTTAAACATCAGCCCTCCAGTAACTTCAGATCCTGACGCTAAACAACTGGAAACAACCTGCAGCGGATTCACATTAACCACCAAAACGCTTTACACCGATCTGTGCTCAACCTCGGATTCTGGTAGCAGTGGAAGCGATTTAAGCCACGAAAATGGTTTTCGCCACACTGTCTACAACCTTGCTCATCGTGAACAACCGACATTGAGCTTAGGCTCCGGAAGGGAAAATTTGAATCCTTATCCTATACAAGGAGCTGTGTCGAGAAACTTCAATTACCTCCACAACTACCAACCTCAGACCAACACCGTTGATTTCAAACGAAATCCTAGAGGCATTCAAGGTGTGAAAAGAAGCTCGAGAGCTCCTAGAATGCGATGGACCACTACCCTCCACGCTCACTTTGTTCATGTGGTTCAGCTTCTTGGTGGACATGAAAGGGCAACTCCGAAGTCTGTGTTAGAGTTAATGAACGTGAAGGATCTAACTCTAGCTCACGTGAAGAGTCACTTGCAGGACGCCATGGCAATCATCGATGGAGACAAATTCAATAAATTACATACAGAGCCCCATTATAAATTCAATGTGTTCTGA 882 0.4399 MDLHEAAIEECIRGEDKDKFKQLHFGVHTLQPFFTINTSVWTGYYSFDYLMQLYIMSSYSKPLLNWNNGTPISTIPMCTIPHTVMPTFAPLPEPDLSLNISPPVTSDPDAKQLETTCSGFTLTTKTLYTDLCSTSDSGSSGSDLSHENGFRHTVYNLAHREQPTLSLGSGRENLNPYPIQGAVSRNFNYLHNYQPQTNTVDFKRNPRGIQGVKRSSRAPRMRWTTTLHAHFVHVVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQDAMAIIDGDKFNKLHTEPHYKFNVF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02283 293 NCBIfam myb-like DNA-binding domain, SHAQKYF class 219 268 IPR006447 GO:0003677
Vian4g02283 293 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 94 268 IPR044847 GO:0000976|GO:0006355|GO:0010158
Vian4g02283 293 FunFam Myb family transcription factor 217 273 - -
Vian4g02283 293 Gene3D - 218 272 - -
Vian4g02283 293 SUPERFAMILY Homeodomain-like 216 269 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02283 Vian-Chr4 39654911 39659056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02283 193 278 G2-like Transcription Factor Family AT5G42630 73.256 5.92e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vian4g02283 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02283 - - vra:106760469 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02283 4 39654911 39659056 Vian4g02283 4 39654911 39659056 ECH
Vian7g00776 7 16026977 16030154 Vian4g02283 4 39654911 39659056 PCT