Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02274 ATGGATTTCAGCAGCACTAGAATGTTGGCACAAGGTCTATTTGTCTTCCTTATGCTTTCGACCATGGCAGAGGCGACAAAGCCCAGAACCATTTTGGTCGGAGACTCCCAAGGTTGGCGTGCGGGCACTAACTACACGCAATGGGCCATTCAAAATAGCCCCTTCCACATAAATGATACACTGGGTGAAGTGTTCAAGTATCCCCCACCAGGAAATTCGACGGTTACGCAGAGCGTGTACTTGCTCCCGAACTTGTGGAGCTACATAACGTGCGAATTCCGAGGAGCAAAGTTGTTGGGGAACGCAAGTGAAGGAGATGACGAAGGGTTTAAGGTTGCACTGAACGAGTCGAAGCCATATTACTTTGCCTCCGCAGAAGGCAACTCTTATGACTGCCTTGCTGGTCTCACCAAGTTCATCGCTGTTCCATCAACACGCTCCACCACCTCTTAA 453 0.4967 MDFSSTRMLAQGLFVFLMLSTMAEATKPRTILVGDSQGWRAGTNYTQWAIQNSPFHINDTLGEVFKYPPPGNSTVTQSVYLLPNLWSYITCEFRGAKLLGNASEGDDEGFKVALNESKPYYFASAEGNSYDCLAGLTKFIAVPSTRSTTS 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02274 150 PANTHER GLYCINE-RICH PROTEIN-LIKE 24 147 - -
Vian4g02274 150 ProSiteProfiles Phytocyanin domain profile. 29 144 IPR003245 GO:0009055
Vian4g02274 150 Gene3D - 27 144 IPR008972 -
Vian4g02274 150 SUPERFAMILY Cupredoxins 29 142 IPR008972 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02274 2 147 Phytocyanin Superfamily AT3G20570 31.544 2.19e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02274 - - vra:106760467 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02274 4 39584908 39585462 Vian4g02274 4 39584908 39585462 ECH