Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02247 ATGAATTTCAAGAGCTTCGGGAATGAAGCTGGTGGCGACGGAGGAGGGAGGCCGGTGGGAAACTTCTCCCTCACGCGGCAGCCGTCGGTGTACTCGCTGACGTTCGACGAGTTCATGAACAGCATGGGAGGTTCCGGGAAGGACTTTGGCTCCATGAACATGGACGAGTTGCTCAAGAACATTTGGACGGCGGAGGAGGTTCAGACAATGACTTCGGCGGGCGTTGCCACCGAGGACGTAGGAGCCGGCGTCAGCCATTTGCAACGGCAGGGGTCGCTGACGCTGCCGCGAACTCTGAGCCAGAAGACAGTGGATGAGGTTTGGAAGGACATTTCGAAGGATTACGGTGGGCACGGAGGGCCCAATCTTGCACAGACGCCGAGACAGCCCACTCTGGGAGAGATGACTTTGGAGGAGTTTCTGGTCAGAGCTGGTGTTGTTAGAGAAGATGCGAAGCCAAACGACGGCGTTTTCATGGATCTGGCTCGTGCGGGGAATAACAACGGTTTGGGGTTTGGGTTCCAGCAGATGAACAAGGTTTCTACTGCTACCGGTTTGATGGGTAACCGGTTGAACAATGATCCACTGGTGGGTCTTCAGTCTTCTGCCAATTTGCCTTTGAGTGTTAATGGGGTGAGATCGTCCAGTCAGCAGCCACAGATGCAGAGTCCACAGTCTCAGCAACAGCATCAGCAGCAGATATTTCCTAAGCAGAGTCCTATGTCTTATGCAGCTGCTCAGATGCCCCAGGGAATGGTTAGGGGTGGGATTGTGGGACTCGGTGGTGATCAGGGTTTGAGCATGCAAGGTGGAGGGATTGGTAGGGTTGGTTTGGCACCTGGGTCAGTTCATGTTGCTACTGGGTCTCCTGCTGCTAACCAAATATCCGGTGATAAGATGACCAAGAGCAATGGTGATACCTCGTCTGTCTCACCGGTTCCTTATGTCTTTAACGGAGGCATGCGGGGGAGGAAGACTGGAGGAGCTGTGGAGAAGGTGATAGAGAGGAGGCAGAGAAGGATGATAAAGAACAGAGAGTCAGCTGCCAGGTCACGGGCACGCAAGCAGGCTTATACCATGGAATTGGAAGCAGAAGTTGCAAAGTTAAAAGAAGAGAACCAAGAACTTGTGAAAAAACAGGCTGAAATCATGGAAATTCAGAAAAATCAAGTTAAGGAAATGATGAATTTGCAACGAGAAGTCAAGAGAAGACGCCTCAGACGAACACAAACTGGTCCGTGGTAG 1245 0.5221 MNFKSFGNEAGGDGGGRPVGNFSLTRQPSVYSLTFDEFMNSMGGSGKDFGSMNMDELLKNIWTAEEVQTMTSAGVATEDVGAGVSHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGGHGGPNLAQTPRQPTLGEMTLEEFLVRAGVVREDAKPNDGVFMDLARAGNNNGLGFGFQQMNKVSTATGLMGNRLNNDPLVGLQSSANLPLSVNGVRSSSQQPQMQSPQSQQQHQQQIFPKQSPMSYAAAQMPQGMVRGGIVGLGGDQGLSMQGGGIGRVGLAPGSVHVATGSPAANQISGDKMTKSNGDTSSVSPVPYVFNGGMRGRKTGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELVKKQAEIMEIQKNQVKEMMNLQREVKRRRLRRTQTGPW 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02247 414 SUPERFAMILY Leucine zipper domain 336 383 IPR046347 GO:0003700|GO:0006355
Vian4g02247 414 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 334 385 IPR004827 GO:0003700|GO:0006355
Vian4g02247 414 MobiDBLite consensus disorder prediction 289 322 - -
Vian4g02247 414 CDD bZIP_plant_BZIP46 336 390 - -
Vian4g02247 414 Gene3D - 334 390 - -
Vian4g02247 414 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 339 354 IPR004827 GO:0003700|GO:0006355
Vian4g02247 414 SMART brlzneu 332 397 IPR004827 GO:0003700|GO:0006355
Vian4g02247 414 MobiDBLite consensus disorder prediction 207 238 - -
Vian4g02247 414 MobiDBLite consensus disorder prediction 1 23 - -
Vian4g02247 414 Coils Coil 352 404 - -
Vian4g02247 414 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 24 414 IPR043452 GO:0003700|GO:0045893
Vian4g02247 414 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 334 391 - -
Vian4g02247 414 MobiDBLite consensus disorder prediction 289 314 - -
Vian4g02247 414 Pfam bZIP transcription factor 336 386 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02247 Vian-Chr4 39371023 39374755 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02247 14 414 bZIP Transcription Factor Family AT1G49720 46.411 6.18e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian4g02247 bZIP_1 9.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02247 K14432 - gmx:100819313 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02247 4 39371023 39374755 Vian4g02247 4 39371023 39374755 ECH