Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02241 ATGAATTCCACAGTCGTAATAAACGTTTCAGAATGTTTTATCAAGCCGTTTGGCCCAGCTCAAGAGTCCAATCGAATATGCAATTTAACTCCTTGGGATATTGGCATGCTGTCTATGCATTACATCCAGAAGGGTCTACTCTTCAAGAAACCTGCAACACTTGTTGATCGACAAGATTTCATAGAGAATCTGTTGGAGAAGCTCAAGCACTCTCTTTCTCTCACCCTCTTCCATTTTTATCCATTGGCAGGCCACCTTGTCACAAACAAAGACCCTTCCTTTTATACTATTTTCGTTGATTGCAACGACAGTCATGGAGCTAGATTCATCTATGCAACTTCGGATTTGACAATATTTGACATACTCTCCCCTGTTGACGTCCCAGCCGTTGTTCACTCGTTCTTTGATCATCACAAAGCGGTCAACCATGATGGTCACACCATGCCTCTGTTGTCCGTTAAAATCACTGAACTATTGGATGGTGTTTTCATAGGCTGTTCTATGAACCACGCCATAGGCGATGGAACATCTTATTGGAATTTCTTTAATACATGGTCTGAGATCTTTCAAGCTCATGCTCAAGGCCATGAATACGGTGTTCCCATTTCACGCCACCCCATTCATAACCGGTGGTTTCCTGATGGTTGTGATCCTTTAATCAATCTTCCCTTTAAACATCACGACCAGTTTATTCGCAGATTTGAAACACCCCAGCTGAGAGAGAGAATCTTCCATTTTTCAGCAGAGTCAATTGCAAAACTGAAAGCAAGGGCTAACTCAGAGTCCAAGACCCCCAAAATCTCTTCGTTCCAATCCTTATCAGCTCATGTATGGAGATGCATAACACGCGCTCGTCAGCTGCCACATGATGAGGTAACTAGCTGCAAATTGGCCATGAATAATCGAGCAAGAATGGAGCCGCCTCTGCCACATGAATACTTTGGAAACTGTATTAGTGTGGTGAGTGCGGGGACAACAGTAGGGGAATTGCTGGAGAATGATCTAGGATGGGCTGCATGGAAGGTGCGCCAGGCCGTTGCAAACCAAAACGACGGAGCAGTGCGACACGCGGTGAAAGAGTGGTTACAACGCCCTGTGGTGTACCAACTTGGTGTGCACTTTGATTCGCGTAGTGTGACGATGTCAAGTTCGCCCAGGTTTGACATGTATGGGAATGAATTTGGGATGGGAAAAGCTGTTGCAGTTCTGAGCGGATATGCCAACAAATTTGATGGGAATGTGACTTCATATCCAGGATCTGAAGGAGGGGGAAGCATAGATTTGGAAGTGTCCCTTTCGCCCGATGCAATGAGCTTACTAGAATCGGATGAGGAGTTTATGGAAGCTGTTTCTGTGGCCAATTCCCTACACCGGCGACTTTGTTGA 1386 0.4531 MNSTVVINVSECFIKPFGPAQESNRICNLTPWDIGMLSMHYIQKGLLFKKPATLVDRQDFIENLLEKLKHSLSLTLFHFYPLAGHLVTNKDPSFYTIFVDCNDSHGARFIYATSDLTIFDILSPVDVPAVVHSFFDHHKAVNHDGHTMPLLSVKITELLDGVFIGCSMNHAIGDGTSYWNFFNTWSEIFQAHAQGHEYGVPISRHPIHNRWFPDGCDPLINLPFKHHDQFIRRFETPQLRERIFHFSAESIAKLKARANSESKTPKISSFQSLSAHVWRCITRARQLPHDEVTSCKLAMNNRARMEPPLPHEYFGNCISVVSAGTTVGELLENDLGWAAWKVRQAVANQNDGAVRHAVKEWLQRPVVYQLGVHFDSRSVTMSSSPRFDMYGNEFGMGKAVAVLSGYANKFDGNVTSYPGSEGGGSIDLEVSLSPDAMSLLESDEEFMEAVSVANSLHRRLC 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02241 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 448 - -
Vian4g02241 461 Pfam Transferase family 13 447 - -
Vian4g02241 461 SUPERFAMILY CoA-dependent acyltransferases 85 201 - -
Vian4g02241 461 Gene3D - 228 442 IPR023213 -
Vian4g02241 461 Gene3D - 8 226 IPR023213 -
Vian4g02241 461 FunFam Tryptamine hydroxycinnamoyl transferase 225 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02241 Vian-Chr4 39245727 39247112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02241 48 441 Monolignol Biosynthesis Gene Families AT5G48930 26.824 1.02e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02241 - - vum:124831304 924.08