Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02238 ATGGGTACTCCTGCCCTACGACGCATTTCGGAGTGTTTTGTGAAGCCTCACCGCTCCAACCACTTATCCGATCAAATCTGCAATTTAACACCTTGGGATATTGCCATGTTGTCTGTGCACTATATTCAGAAGGGTCTACTCTTCAAGAAGCCTGCAACCCTGCTTCATGAAAACGATTTCATACAAAATCTGTTGGAGAACCTCAAGCACTCTCTTTCTCTCACCCTCTCCCATTTTTATCCATTGTCTGGTCGCCTTGTCACTCACAAAACCCAAAACCCTCCCTCTTATATTGTTTCTGTTGATTGCAACAACAGTGATGGAGCTAGATTCATTCATGCAACTCTGGATATCACCATAGCTGATATCCTCTCCCCCCTTGATGTCCCACCGATTGTTCAATCATTCTTTGACCACCACAAAGCAATCAACCATGACGGTCACTCCATGCCGCTGTTGTCCATCCAAGTCACTGAACTAGTGGACGGTGTTTTCATAGGTTGTTCCATGAACCATGTTATTGGCGATGGAACTTCTTATTGGAATTTCTTCAATTCATGGTCTCAGATCTTTCAAGCACAATCTCAATCTGAAAACCGTGAATACGATGTTCCCATCGCACGCCAACCCATTCACAATCGTTGGTTTCCAAATAATTGTAGACCACCGATCTCTCTTCCTTTCAAACATCATGACGAGTTTCTAGAGAGATCTGAAAAACCCCTCCACCTGAGAGAGAGATTTTTCCACTTTTCAGCAGAGTCTATTGCCAAACTGAAAGCAAAGGCCAATTCAGAATCCAATACCACAACAATATCTTCCTTCCAGTCATTATCAGCACTTGTTTGGAGGTCCATAACTCGTGCGCGCTCCATACCGTCTGACCAAAAAACAACTTGCAGATTAGCCGCAAGCAATCGATCAAGAATGGAGCCGCCTCTGCCTGAAGAATACTTTGGAAACTGCCTTCATGCAGTGAATGCAGAAACGACAACAGGGGAATTGCTTGAGAATGATCTAGGATGGGCGGCATGGAAGTTGCATGTGGCTGTTAAAAACCTTGACGATAGAGTGGTGTTGCAGTATCTCGGAGAGTGGTTAGATTCTCCTGTGATATATCAAATGGGTCGTTTCTTTGAACCATATTGTGTGATGATGGGTAGCTCCCCGAGGTTCAATATGTATGGGAGTGAATTTGGAATGGGGAAAGCGGTGGCTGCTAGAAGTGGCTATGCAAATAAATTTGATGGGAAAGTGTCATCATACCCAGGGCGTGAAGGAGGAGGAAGCATTGATTTGGAAGTTTGCCTTTTCTCACATACAATGAGTGCCTTGGAATCAGACAGGGAATTCATGCATGCAGTTTCTGAGTTCAATCCCCTGCGGTTCTAG 1392 0.4454 MGTPALRRISECFVKPHRSNHLSDQICNLTPWDIAMLSVHYIQKGLLFKKPATLLHENDFIQNLLENLKHSLSLTLSHFYPLSGRLVTHKTQNPPSYIVSVDCNNSDGARFIHATLDITIADILSPLDVPPIVQSFFDHHKAINHDGHSMPLLSIQVTELVDGVFIGCSMNHVIGDGTSYWNFFNSWSQIFQAQSQSENREYDVPIARQPIHNRWFPNNCRPPISLPFKHHDEFLERSEKPLHLRERFFHFSAESIAKLKAKANSESNTTTISSFQSLSALVWRSITRARSIPSDQKTTCRLAASNRSRMEPPLPEEYFGNCLHAVNAETTTGELLENDLGWAAWKLHVAVKNLDDRVVLQYLGEWLDSPVIYQMGRFFEPYCVMMGSSPRFNMYGSEFGMGKAVAARSGYANKFDGKVSSYPGREGGGSIDLEVCLFSHTMSALESDREFMHAVSEFNPLRF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02238 463 FunFam Tryptamine hydroxycinnamoyl transferase 230 448 - -
Vian4g02238 463 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 452 - -
Vian4g02238 463 Gene3D - 8 225 IPR023213 -
Vian4g02238 463 Pfam Transferase family 14 452 - -
Vian4g02238 463 Gene3D - 229 447 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02238 Vian-Chr4 39232043 39233434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02238 68 446 Monolignol Biosynthesis Gene Families AT5G48930 28.218 5.61e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02238 - - vra:106761257 798.505