Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02233 ATGACCATCAGCATGAAGGTGCATCACTTCACACGTGCATTCTGGGAGCACGAACCCTTCCTCACCCTTGGCTGCAAGCGATTACGCCCTCTTGCTCCCAAGCTTCCCAACCTACACACCACCACCCCTTCTCTTCCTTTCGATCTCAAGAGCTTCATCAGACCAGAAAGTTGTCCCAGGAAACAAGTTTCCTCTCTCCACAATAACAAGGATCCACCTTCACCCCAAGGCCAGGTTGAAACGCATCCAGGAGGGACGCGGTGGAATCCGACGCAAGAACAGATAGGTATATTGGAGATGCTGTACAAAGGAGGGACGAGAACTCCAAATGCTCAGCAGATAGAGCAGATCACTGTTCAGTTAGGAAAGTACGGAAAGATCGAAGGGAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCACGCAAGAGACAAAAGCAGAAGCGTAACAGCCTTGCCTTTTCTCATAGTCCTCGAACTCCCACAATTCATTCTGTTGTTACTTTAGAGGCAGCAAAGGGGGAAGTAGTAGATAGAGACGAGGAGGAAGGTAGTCCGTACAAAAAGAAGTGTAGGAGATGGGTATTTGATTGTTTGGAAGAGCAAAGCATGTCGTCGTCATCATTGTGTGAAGAGGAGGAATATAGAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGAAGATGA 687 0.4774 MTISMKVHHFTRAFWEHEPFLTLGCKRLRPLAPKLPNLHTTTPSLPFDLKSFIRPESCPRKQVSSLHNNKDPPSPQGQVETHPGGTRWNPTQEQIGILEMLYKGGTRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARKRQKQKRNSLAFSHSPRTPTIHSVVTLEAAKGEVVDRDEEEGSPYKKKCRRWVFDCLEEQSMSSSSLCEEEEYRTLELFPLHPEGR 228
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02233 228 ProSiteProfiles 'Homeobox' domain profile. 81 146 IPR001356 GO:0003677
Vian4g02233 228 PANTHER WUSCHEL-RELATED HOMEOBOX 4 5 228 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Vian4g02233 228 MobiDBLite consensus disorder prediction 59 89 - -
Vian4g02233 228 FunFam WUSCHEL-related homeobox 4 85 152 - -
Vian4g02233 228 Pfam Homeodomain 86 145 IPR001356 GO:0003677
Vian4g02233 228 SUPERFAMILY Homeodomain-like 82 153 IPR009057 -
Vian4g02233 228 CDD homeodomain 86 147 IPR001356 GO:0003677
Vian4g02233 228 Gene3D - 86 151 - -
Vian4g02233 228 SMART HOX_1 83 150 IPR001356 GO:0003677
Vian4g02233 228 MobiDBLite consensus disorder prediction 61 89 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian4g02233 Vian-Chr4 39187059 39188102 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02233 5 152 Wox Gene Family AT1G46480 63.580 7.21e-62 190
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian4g02233 Homeodomain 1.7e-18 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02233 - - gmx:100781015 395.201