Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02227 ATGGAAAGTGGATTACCTTTGCTTAACTGTCTCTTGCAGCAGACTCTCAGAACCATTTGCACTTCTTCCAATTCTTCCACTTCTTCTAAGTGGGTTTATGCTGTCTTCTGGAGGATACTGCCTCGAAACTTTCCTCCACCAAGGTGGGAATTTGGAGGAACTGCGCTTGATCTCTCCAAAGGAAATAAAAGGAACTGGATTCTTGTCTGGGAAGATGGGTTCTGCGATTTTAACGAATGCGAACAGAGGAAGAGTGGTAGCGGTTATTTGAACGGTAGATTTGGAGCTGACGTATTCTTCAAAATGTCGCATGAGGTTTACAATTATGGAGAGGGACTAGTGGGAAAAGTTGCCGCAGATAATGGTCACAAATGGGTTTACAACGAGAGTCACAACAACGAGTGTGAAGCTAGCTATATTGCTACATGGAACACTTCGGTAGAGCCTCAACCAAAGGCATGGGAGTCTCAGTTCAATTCAGGCATTCAGAGTATAGTCATAATAGCAGTCAGAGAAGGCGTTGTGCAATTGGGTTCTTTTAACAAGATTGCAGAGGACCTGAATCTGGTGATCAGCATACAAAGACAATTCAGCTACCTCCAAAGCATACCGGGTGTGTTTGGTATTCAAAGATCATACCTACCGATTCAACATCCATACATTGTGAAGCCCAGTTTCATAGAAAGCAATGGAATGCCTCCATATGACATGGCCTGGAACAACCCTCAAATTGGAGCACCAGGCCCATCTCTTTGTTCAGGTTCTCCACCTTTACAATTACCATTACCATTACCATTACCATTACCAACCATGCCTTGCAGTTTTGGAGCTTTGCTATCGAAGTTACCATCTGGAATCCCACTGCATAATCAAGTCCCTAATTCTGGGACACAGAGCAGCACCATCGAGAGAGTGAAGATTGAGGACTGCGAATTTTATCCTACCCATGACGGTGATCACAAGGGAAAGGTTCCTTCCTTGAACGAGTAG 990 0.4424 MESGLPLLNCLLQQTLRTICTSSNSSTSSKWVYAVFWRILPRNFPPPRWEFGGTALDLSKGNKRNWILVWEDGFCDFNECEQRKSGSGYLNGRFGADVFFKMSHEVYNYGEGLVGKVAADNGHKWVYNESHNNECEASYIATWNTSVEPQPKAWESQFNSGIQSIVIIAVREGVVQLGSFNKIAEDLNLVISIQRQFSYLQSIPGVFGIQRSYLPIQHPYIVKPSFIESNGMPPYDMAWNNPQIGAPGPSLCSGSPPLQLPLPLPLPLPTMPCSFGALLSKLPSGIPLHNQVPNSGTQSSTIERVKIEDCEFYPTHDGDHKGKVPSLNE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02227 329 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 301 - -
Vian4g02227 329 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 197 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02227 Vian-Chr4 39089723 39091382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02227 13 201 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.579 1.79e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02227 - - vum:124839635 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02227 4 39089723 39091382 Vian4g02227 4 39089723 39091382 ECH