Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02211 ATGGAAACTCGTGCTGGGGCAAAGAGAAAGAGAAAGGAAGCTGTTGTGGTGGTGGAAAAACAACACCCCAAGATGCATAGGGTTGTATTGGGTGAACTTCCCAATCTACCAAACCTTATTGTCCTCAAAAATCAAAATCTGGCCAAACAGAAAGTTTCATGTTGGAAAAATCCCAACATCAAGAAACTACCTTCTCCTCAGATAGACCAATATTATGTATCTGACATCGATGAATATCTTCGTGAAATGGAGACGAAGAAAAGACCAATAGTTAACTATATGGACAAAGTTCAGTTGGTACTTACAGCAAACATGAGACAGATATTGGTGGATTGGCTAGTAGATGTTGCTGTGGAGTATAAGCTTCTCTCTGAAACTCTTCATCTTTGTGTTTCATTAATAGATAGGTTTTTATCAGTTAGTCCTGTGACAAAGTCCAAGCTTCAGTTAGTAGGTGTTTCTTCCATGCTTCTTGCCTCGAAGTATGAGGAAACTAAACCACCCAGTGTGCGCAAATTTTGCAGCATCACTGATAACACTTTTGAAAAGAAAGAGGTTGTAAAGATGGAAGCTGAAATACTTGAGTCTCTAAACTTTGAAATTGGCAATCCTACTGCAATCACTTTTCTAAAGAGATTTTTGAGTGTTGCTTCTGTGAACCAAAACACACCAAATTTGAAGATTGAGTTCCTGAGCTTTTACCTTGCTGAGCTAAGTTTGTTGGATTATAGTTGTATAAGATTCTTGCCTTCCATTATAGCTGCATCTGCTTTATTTCTTGCCAGGTTTATTACCTCTCCCAAAGTGCATCCTTGGAGTTCTTCCCTGGGTGAATGGTCCGGTTACAAACCATTTGAGTTGAAAGTCTGTGTTGTCACTTTGCATGACTTATATTTTTCAAGAAAGGCAGCATCATTCCGATCTGTTAGGGATAAATATAAACAGTGCAAGGGATCTTAG 960 0.3875 METRAGAKRKRKEAVVVVEKQHPKMHRVVLGELPNLPNLIVLKNQNLAKQKVSCWKNPNIKKLPSPQIDQYYVSDIDEYLREMETKKRPIVNYMDKVQLVLTANMRQILVDWLVDVAVEYKLLSETLHLCVSLIDRFLSVSPVTKSKLQLVGVSSMLLASKYEETKPPSVRKFCSITDNTFEKKEVVKMEAEILESLNFEIGNPTAITFLKRFLSVASVNQNTPNLKIEFLSFYLAELSLLDYSCIRFLPSIIAASALFLARFITSPKVHPWSSSLGEWSGYKPFELKVCVVTLHDLYFSRKAASFRSVRDKYKQCKGS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02211 319 FunFam G2/mitotic-specific cyclin 89 201 - -
Vian4g02211 319 Gene3D - 75 316 - -
Vian4g02211 319 PANTHER CYCLINS 58 314 IPR039361 -
Vian4g02211 319 Pfam Cyclin, C-terminal domain 204 317 IPR004367 -
Vian4g02211 319 SUPERFAMILY Cyclin-like 204 316 IPR036915 -
Vian4g02211 319 FunFam Cyclin superfamily protein, putative 202 273 - -
Vian4g02211 319 Gene3D - 89 202 - -
Vian4g02211 319 ProSitePatterns Cyclins signature. 106 137 IPR006671 -
Vian4g02211 319 SMART cyclin_7 111 195 IPR013763 -
Vian4g02211 319 SMART cyclin_7 208 296 IPR013763 -
Vian4g02211 319 Pfam Cyclin, N-terminal domain 76 201 IPR006671 -
Vian4g02211 319 SUPERFAMILY Cyclin-like 65 201 IPR036915 -
Vian4g02211 319 SMART Cyclin_C_2 204 319 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02211 Vian-Chr4 38876771 38878631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02211 3 317 Core Cell Cycle Gene Families AT5G43080 53.251 1.46e-112 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02211 K06627 - gmx:100786875 437.958