Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02210 ATGGAGACCCGTGCAGCTGCAAAGAGAAAGGCAACCGCTGCTGCTGCTCCCATGGTGGTGGTCCAAAAACAACATCCCAAAAGGCAGCGTGTTGTGCTGGGTGAACTTTCAAATTTTCCGAATGCAACTCAAAACAAACGCAAAGAGAAACTACAATGTCGGAAGAATCCAAATTTAAAGAAACCATCTCCCACAGAGTTCATTTCCTCTTCCTCACAGTTTGACCAACCTTACGTTTTCGACATCTATGAGTATCTTCATGGGATGGAGATGCAGAAGAAGAGGAGACCAATGATTGACTACATCGAGAAAGTTCAGAGAGAAGTTACTGTAATCATGAGGACAATATTGGTGGATTGGTTAGTGGAGGTAGCTGAAGAGTACAATCTTCACTCGGATACCCTTCATCTCTCTGTTTCATACATAGATAGATTTTTATCAGTGAATCCTGTTAGTAAGTCAAGACTTCAATTACTTGGTGTTTCGGCCATGCTCATTGCTGCAAAGTATGACGAAGTTGATCCACCCCGTGTTGATGCTTTTTGCAACATCACTGACAACACATACAAGAAGGCAGAGGTTGTAAAGATGGAAGCTGACATACTCAAGTCTCTAAAGTTTGAGATGGGAAATCCTACTGTGAACACCTTTCTAAGGAGGTTTGTTGATGTTGCTTGTGATAACCAAAAGGCTTCAAATTTACAGTTTGAATTTCTAAGCTGCTATCTTGCTGACCTAAGTTTGTTGGACTACGATTGCTTGAGAATTTTGCCTTCTATAGTGGCAGCTTCAGCTGTATTTCTTGCCAGATTTATTATTGCTCCTGAAGTTCATCCTTGGACTTCTTCCTTGTCTGAGTGTTCTGGTTACAAACCAGTTGAACTGAAAGAATGTGTCATGATTTTGCATGACTTGTATTTTTCAAGAAAGGCAGCGCCTTTCAAAGCTGTCAGGGAGAAATACAAGCAGCACAAGGATTTAGTTCTTTCTATGTGGAAAGAGGAATTTGAGATCTTGCTTCACATCATTGATCCACATGTTGATAATTGCAATCTCGAGGAAGACAGAAAGAGAAAGTCAAATTCCATTGCCTCAGTTGTGGTTCAGAGACAACATCCCAAGAAGCAACGGGTTGGGTTCACTCAACCTTCCAATTTACCAAACTTCATTCTCTCAAAAAATGAGTCTTTGCAAAGAGAATCTGCAATCTCCTGGAATAATGTCAACCTTGAAAAACCAAATTCCATAAACAACTTTCTTCTTTCCTCTCAAATTCATGAACTTGATGTTTGGGACATCAATGAGTATCTTCGTGTCTTGGAGAGAAAAAGAAGACCTGTGGTTAACTATATTCAGAAAGTTCAAAGAACAATTACCTCCAACAACAGAGCAGTACTGGTGGATTGGTTAGTAGAAGTTGCCGAGCAGTACAATCTTCTCTCCGATACTCTTCTGCTCTGTGTGTCATACATTGATAGATTTTTATCAGTCCAGCCCATGATCAGATCGAGGCTTCAATTGTTGGGTGTTTCCTGCATGTTCATTGCTTCGAAATATGAAGAAATTAATCCACCCAGTTTGAATGAGTTTTGCAACATCACTGACAACACCTATGACAAAACAGAGATTATAAAGATGGAAGCTGAAATACTCAAGGCCCTAAATTTTGAGATGGGAAATCCTACTGCAATCACTTTTTTGAGGTTTTTATCTGGTGCTGCTTCTGATTATCAAAAAACTCCAAATTGGAAGATTGAATTTCTGGGCTGGTATTTTGCTGAGCTAAGTTTGTTGGATGATGATTGTATAAGATTCTTGCCCTCTGTTGTAGCAGCTTCCGCTTTATTTCTGGCAAGATTTTTTATTGATCCTAAAGTGCATCCTTGGACTTCTTTCTTGTTTGAATGTTCGGGTTACAAACCAGTTGAGTTGAAAGAGTGTGTTCTCATCTTGCATGATTTGCATTTGTCAAGGAAGGCAGAATCATTCGAAGCTGTTAGGGAGAAATACAAGCAGCACAAAGTGTTCAAATACGTGTCAAATCTACCTTCTCCTTCATATGTACCAAGTAACTACTTTGAAGACCAGTTGCATATGACTGATCAGCAAAATTTGTTCGAAGTTACTGGATGCAGCGTTTATGCAATGAGAGGTGATACAGTTTGCAAATCTGCAACCCTCTAG 2184 0.3979 METRAAAKRKATAAAAPMVVVQKQHPKRQRVVLGELSNFPNATQNKRKEKLQCRKNPNLKKPSPTEFISSSSQFDQPYVFDIYEYLHGMEMQKKRRPMIDYIEKVQREVTVIMRTILVDWLVEVAEEYNLHSDTLHLSVSYIDRFLSVNPVSKSRLQLLGVSAMLIAAKYDEVDPPRVDAFCNITDNTYKKAEVVKMEADILKSLKFEMGNPTVNTFLRRFVDVACDNQKASNLQFEFLSCYLADLSLLDYDCLRILPSIVAASAVFLARFIIAPEVHPWTSSLSECSGYKPVELKECVMILHDLYFSRKAAPFKAVREKYKQHKDLVLSMWKEEFEILLHIIDPHVDNCNLEEDRKRKSNSIASVVVQRQHPKKQRVGFTQPSNLPNFILSKNESLQRESAISWNNVNLEKPNSINNFLLSSQIHELDVWDINEYLRVLERKRRPVVNYIQKVQRTITSNNRAVLVDWLVEVAEQYNLLSDTLLLCVSYIDRFLSVQPMIRSRLQLLGVSCMFIASKYEEINPPSLNEFCNITDNTYDKTEIIKMEAEILKALNFEMGNPTAITFLRFLSGAASDYQKTPNWKIEFLGWYFAELSLLDDDCIRFLPSVVAASALFLARFFIDPKVHPWTSFLFECSGYKPVELKECVLILHDLHLSRKAESFEAVREKYKQHKVFKYVSNLPSPSYVPSNYFEDQLHMTDQQNLFEVTGCSVYAMRGDTVCKSATL 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02210 727 ProSitePatterns Cyclins signature. 114 145 IPR006671 -
Vian4g02210 727 Gene3D - 432 677 - -
Vian4g02210 727 SMART cyclin_7 568 653 IPR013763 -
Vian4g02210 727 SMART cyclin_7 119 203 IPR013763 -
Vian4g02210 727 SMART cyclin_7 468 552 IPR013763 -
Vian4g02210 727 SMART cyclin_7 216 304 IPR013763 -
Vian4g02210 727 Pfam Cyclin, N-terminal domain 81 209 IPR006671 -
Vian4g02210 727 Pfam Cyclin, N-terminal domain 432 558 IPR006671 -
Vian4g02210 727 MobiDBLite consensus disorder prediction 43 68 - -
Vian4g02210 727 SUPERFAMILY Cyclin-like 212 331 IPR036915 -
Vian4g02210 727 SMART Cyclin_C_2 212 330 IPR004367 -
Vian4g02210 727 SMART Cyclin_C_2 561 685 IPR004367 -
Vian4g02210 727 FunFam G2/mitotic-specific cyclin 446 559 - -
Vian4g02210 727 SUPERFAMILY Cyclin-like 561 686 IPR036915 -
Vian4g02210 727 Gene3D - 446 559 - -
Vian4g02210 727 Gene3D - 95 210 - -
Vian4g02210 727 Pfam Cyclin, C-terminal domain 212 325 IPR004367 -
Vian4g02210 727 Pfam Cyclin, C-terminal domain 561 684 IPR004367 -
Vian4g02210 727 SUPERFAMILY Cyclin-like 73 209 IPR036915 -
Vian4g02210 727 FunFam Cyclin superfamily protein, putative 209 281 - -
Vian4g02210 727 FunFam G2/mitotic-specific cyclin 97 208 - -
Vian4g02210 727 CDD CYCLIN_AtCycA-like_rpt2 212 325 - -
Vian4g02210 727 Gene3D - 81 325 - -
Vian4g02210 727 PANTHER CYCLINS 413 672 IPR039361 -
Vian4g02210 727 ProSitePatterns Cyclins signature. 463 494 IPR006671 -
Vian4g02210 727 SUPERFAMILY Cyclin-like 427 558 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02210 Vian-Chr4 38863592 38869123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02210 357 695 Core Cell Cycle Gene Families AT1G47210 45.098 1.10e-92 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02210 K06627 - gmx:100787417 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02210 4 38863592 38869123 Vian4g02210 4 38863592 38869123 ECH