Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02202 ATGGTTATCACAACCTTCAACGGAGCTGGCGTTGGATTTGGTTTCGGCGTAGGTTGCGGTTTCGGTGTAGGATGGGGTTTCGGAGGTATGCCATTGAACTTATTGGGTCTTGGTGCAGGTGGAGGCTGTGGCGTTGGAGTAGGACTTGGTTGGGGGTTTGGTACTGCCTTTGGTAGCAAGTATCGGTCCTCACGGGTCACATTTCAAGGAGTGGAATTTGATAGCAAGGAGACAGTTAACAGCAAGGAGTTCTCAAAGCCCAGTACAGAAGTTGCTCAGCACAGATCCAACAAAGACTGTTGGGTGGTGATCAATGGAAGAGTTTTGGATGTGACAAAGTTTTTGGAGGAACACCCGGGAGGGGAAGAGGTGATTCTAGAAGTGGCTGGGAAGGAGGCGACGAAGCAATTTGATGCCATTGGACACAGCAAAGCAGCACAAAACATGGTACTAAAGTACCAGGTTGGTGTTCTCGAAGGTGCCAAGGTTGAAGAGGTAGACATGAACGATGATGTTGTTGACATGGAATCCAACAGCAAAGAGATGAGTGCCTTCGTCATCAAAGATGGTGCAAACTATAAGTCAACCTCATTTTACGAGTTCTTTGTTCCTCTTCTTGTTGCTGCTCTCTACTTTGGCTATCGATGCCTCACCGTCCCTCAATATTAG 669 0.4768 MVITTFNGAGVGFGFGVGCGFGVGWGFGGMPLNLLGLGAGGGCGVGVGLGWGFGTAFGSKYRSSRVTFQGVEFDSKETVNSKEFSKPSTEVAQHRSNKDCWVVINGRVLDVTKFLEEHPGGEEVILEVAGKEATKQFDAIGHSKAAQNMVLKYQVGVLEGAKVEEVDMNDDVVDMESNSKEMSAFVIKDGANYKSTSFYEFFVPLLVAALYFGYRCLTVPQY 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02202 222 Gene3D - 79 164 IPR036400 -
Vian4g02202 222 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 90 159 IPR001199 -
Vian4g02202 222 FunFam Cytochrome b5 type B 80 163 - -
Vian4g02202 222 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 114 121 IPR018506 GO:0020037
Vian4g02202 222 SMART Cyt_b5_2 86 159 IPR001199 -
Vian4g02202 222 PANTHER CYTOCHROME B5 80 217 - -
Vian4g02202 222 Pfam Cytochrome b5-like Heme/Steroid binding domain 89 158 IPR001199 -
Vian4g02202 222 PRINTS Cytochrome B5 signature 146 158 IPR001199 -
Vian4g02202 222 PRINTS Cytochrome B5 signature 118 132 IPR001199 -
Vian4g02202 222 PRINTS Cytochrome B5 signature 108 118 IPR001199 -
Vian4g02202 222 PRINTS Cytochrome B5 signature 133 140 IPR001199 -
Vian4g02202 222 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 89 163 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02202 Vian-Chr4 38796767 38802016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02202 89 218 NADPH P450 reductases AT5G48810 43.182 9.29e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02202 - - gmx:100797990 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02202 4 38796767 38802016 Vian4g02202 4 38796767 38802016 ECH