Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02191 ATGCTTTCTATTAAAAGCCCGGCCCGCTTCTTAGACCTCAGGTTTAGGGCAGGGCCCACTCAGGGTTCAAGCAACCCGACCCGACCCGACCCGGACACAGGCCCTGTGGGTTTTTGCTCACCACGCGCTGCGGAAGCGCAAGTGAGTCGACAGTGGCACTCAAAACGCAAAGACTTTATGGAAAACTCTTTTTCCCCCCAAATGGATGATCTTTCGTCCAGCCTTCTGTGCCAAGAAAACGATACGTGTTTGGAAGAAGGAGGTGATGAATTAGAATGCCAATTGGTTGGATCACGGCATGATTGTGGGGTTTCGGAGGATGAGTATGTGGGGATTTTGGTTGAGAGAGAGATCGTTCTTGGGTTCAGAAGGGACGAAAGTTTGGTATTTGGGGACTGGATGAAGCGTGCACGCTTGGAGGCAATCAATTGGATTCTCAAAACAAGAGCAACATTGGGTTTTCGCTTCGAAACGGCTTATTTGTCAGTCACATACTTCGATCGATTTCTTTCTAGACGGTCCATTGATAGTGAAAAGTGGTGGGCAATTCGGTTGCTTTCAATTGCATGTCTCTCTTTGGCTGCAAAGATGGAGGAGTGCAATGTGCCAGAGCTATCAGAGTTCAAATCGGAAGACTATTCCTTTGAGGGAAAAGTGATTCAGAAAATGGAGCTCTTGGTGCTCACCACATTGGAGTGGGAAATGGGTATCATCACTCCCTTTGATTTTCTTTCCTATTTCATCACAAAGTTCTGTAAAGAATCTCCACCAAGTCCTACTTTTTCCAAGACCATGCAACTCATCTTTACCACTATGAAAGAGGTAAATTTAATGGATCAAAAACCATCAGTTATTGCAGCGGCTGCTACATTAGTGGCAATGGATCAAAAAATGACGATGGAGGAGGTGGAGTTGAAGATGAGTTCAATTCCTCAACATAGGCTTCTAGAACCTAAAGATGTATTGGAGTACTACAATCTAATTCAAAGATTACAGGAGGAGGAGACCAAAAGGGACACGCACACGCCAATCGACGTGACTGACAGCTCCAGAGTTACTTCTTCCGCAGCAATGGCAAAGAGAAGAAGACTCACATTCAGTGATGAAGGAAGTAGTCATGGGAAGAAGGGAGAGGGCTAG 1140 0.4579 MLSIKSPARFLDLRFRAGPTQGSSNPTRPDPDTGPVGFCSPRAAEAQVSRQWHSKRKDFMENSFSPQMDDLSSSLLCQENDTCLEEGGDELECQLVGSRHDCGVSEDEYVGILVEREIVLGFRRDESLVFGDWMKRARLEAINWILKTRATLGFRFETAYLSVTYFDRFLSRRSIDSEKWWAIRLLSIACLSLAAKMEECNVPELSEFKSEDYSFEGKVIQKMELLVLTTLEWEMGIITPFDFLSYFITKFCKESPPSPTFSKTMQLIFTTMKEVNLMDQKPSVIAAAATLVAMDQKMTMEEVELKMSSIPQHRLLEPKDVLEYYNLIQRLQEEETKRDTHTPIDVTDSSRVTSSAAMAKRRRLTFSDEGSSHGKKGEG 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02191 379 MobiDBLite consensus disorder prediction 15 40 - -
Vian4g02191 379 ProSitePatterns Cyclins signature. 138 169 IPR006671 -
Vian4g02191 379 SMART Cyclin_C_2 238 357 IPR004367 -
Vian4g02191 379 Pfam Cyclin, N-terminal domain 136 235 IPR006671 -
Vian4g02191 379 Pfam Cyclin, C-terminal domain 238 338 IPR004367 -
Vian4g02191 379 Gene3D - 134 236 - -
Vian4g02191 379 MobiDBLite consensus disorder prediction 362 379 - -
Vian4g02191 379 FunFam Cyclin-D5-1 237 325 - -
Vian4g02191 379 CDD CYCLIN_AtCycD-like_rpt2 238 328 - -
Vian4g02191 379 PANTHER CYCLINS 81 329 IPR039361 -
Vian4g02191 379 FunFam Cyclin-D5-1 133 236 - -
Vian4g02191 379 CDD CYCLIN_AtCycD-like_rpt1 137 233 - -
Vian4g02191 379 Gene3D - 237 303 - -
Vian4g02191 379 MobiDBLite consensus disorder prediction 335 379 - -
Vian4g02191 379 SMART cyclin_7 242 330 IPR013763 -
Vian4g02191 379 SMART cyclin_7 143 229 IPR013763 -
Vian4g02191 379 SUPERFAMILY Cyclin-like 221 310 IPR036915 -
Vian4g02191 379 SUPERFAMILY Cyclin-like 101 235 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02191 Vian-Chr4 38714214 38716178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02191 75 310 Core Cell Cycle Gene Families AT4G37630 38.492 1.09e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02191 K18811 - gmx:100798728 536.954