Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02168 ATGTTGCTCCACGAAGCGGTTCAGTTCCCGTCTTCTCCGGTTCACCAAACCATGCTGACGCAAAGTGATATAGAAGACCTGTTTTCTCTCATAAACAAATCCATAGACCGGCCCAGTCCGGGCTCCGGTTCGCAGGGATCGAACCGGACGGTTTACTCGTCCGAGGAAAGAAAGCTGAGACGCATGCAATCGAACCGGGAATCGGCCCGAAGGTCCCGCTACAGAAAGAAGAAGCATCTTGAGAACCTGACGAGCCAACTGAAGCGGTTGAGAATCCAAAACCGGTTTCTCAAAAACCGACTCGCCTCGACCATGCACCAACACCTCCTTCTATCCCTACATAACGATCATCTTAAATCCGAAGCTATTGCCCATATGGCCACTCTTTCGGATCTGTGTGGGATTTTGTTTTAG 414 0.5048 MLLHEAVQFPSSPVHQTMLTQSDIEDLFSLINKSIDRPSPGSGSQGSNRTVYSSEERKLRRMQSNRESARRSRYRKKKHLENLTSQLKRLRIQNRFLKNRLASTMHQHLLLSLHNDHLKSEAIAHMATLSDLCGILF 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02168 137 MobiDBLite consensus disorder prediction 53 69 - -
Vian4g02168 137 Coils Coil 80 107 - -
Vian4g02168 137 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 60 75 IPR004827 GO:0003700|GO:0006355
Vian4g02168 137 SUPERFAMILY Leucine zipper domain 57 111 IPR046347 GO:0003700|GO:0006355
Vian4g02168 137 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 55 102 IPR004827 GO:0003700|GO:0006355
Vian4g02168 137 MobiDBLite consensus disorder prediction 35 52 - -
Vian4g02168 137 Coils Coil 52 72 - -
Vian4g02168 137 CDD bZIP_plant_GBF1 58 108 IPR045314 GO:0003700|GO:0006355
Vian4g02168 137 MobiDBLite consensus disorder prediction 33 75 - -
Vian4g02168 137 SMART brlzneu 53 124 IPR004827 GO:0003700|GO:0006355
Vian4g02168 137 FunFam BZIP transcription factor 55 106 - -
Vian4g02168 137 Pfam bZIP transcription factor 56 104 IPR004827 GO:0003700|GO:0006355
Vian4g02168 137 Gene3D - 55 108 - -
Vian4g02168 137 PANTHER BZIP TRANSCRIPTION FACTOR 44 40 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02168 Vian-Chr4 38537508 38537921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02168 13 118 bZIP Transcription Factor Family AT3G49760 42.105 3.70e-17 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian4g02168 bZIP_1 1.9e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02168 - - gmx:102661984 221.861