Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02132 ATGGGGTTTTCTGGAAAGCTTTGTGGGATGAAGGTGGTGGTGAGTGATAGTGATTTGCAAAAGTCAGAGAAGCTGGGTGTAAAAGAATGGTTTGGAAAAAATCATTTTGAGAGTAGATGTGGTATCGATTCCGGAAGCATAGATATGCTTTCTGAAGAGGCCATTTGCATCTCCAACTCCGATCACTCTGCATCTGCAACTTCTTTTTGGTCGGTGAATGGGAAAACTGACGCGCAGCTGCACTGTCCAGTGAAGGAGAAGAAAAGAATAAAACACATTAGGATTTGTGGCCGCTGCTCCACCAACTGGTTGGAAACACTTCTCTCTTTTCAGAAACCGTCTTTCTTCCACAACCTTCTGGAATCGATGACCAACTCCACCTGCGCAGGCGCTGAGTTCGATCAGTGCCGAGACGAGTCGGCGGCGTTGGTTCTCAAATTCGTCGCCATCGCCTCCATTCTCCTCTCCGGCATGGCCGGAATAGCGATCCCCCTCGTCGGAAAACACCGCCGCTTCCTCCGCACCGACGGCAACCTCTTCGTCGGTGCCAAGGCCTTTGCCGCCGGGGTGATCCTGGCCACGGGATTCGTCCACATGCTCTCTGATGCCACCGACGCGCTCCAGCACCCGTGCCTGCCTTCGTTCCCGTGGTCCAAGTTCCCTTTCACCGGCTTCTTCGCCATGATGGCCGCGCTTTTCACTCTCCTCCTCGATTTCGTGGGAACGCAATACTACGAGCGCAAGCAGGGGCTCAACCGTCCCTCGGAGGAGCAGTCTCGGGTCGGGTCGTCCGAATCCGGAGGGAAGGTGTTTGGAGAAGAAGAGAGTGGGGGAATGCACATCGTGGGGATGCATGCACACGCCGCGCATCATCGACATAACCACCCCCATGGCCATGACTCGTGCCATGGCATTGGCGGCGAGAAGGAACAAGATAATGCGCTTGCTGACTCCCATGGACACGGTCACGGTCACCTCCACGGCCACTCCCACATGGAAGATGTCGAAGAAACCGACGTTCGACACGTCGTGGTTTCTCAGGTGTTGGAGCTTGGGATTGTGTCACATTCGGTAATCATCGGGTTGTCTCTTGGGGTTTCTCAAAGTCCTTGTACCATAAGGCCTCTGATTGCGGCGTTGTCTTTTCATCAGTTTTTTGAAGGGTTTGCGCTTGGAGGGTGCATTTCCCAAGCGCAGTTTAAAGCCTCCTCAGCAACCATAATGGCTTGTTTTTTTGCATTGACTACACCGTTGGGTGTTTCGATCGGAACGGCCATTTCTTCAAGGTTTAATCCTTACAGCCCCGGTGCACTCATCACCGAAGGTATTCTGGATTCCTTGTCGGCGGGGATTTTGGTGTATATGGCTTTGGTAGATTTGATAGCTGCGGATTTTCTTAGCAAGAGAATGAGTTGTAACTTCAGGCTACAGATAGCCTCTTACTGCATGCTTTTCCTTGGGGCTGGATTGATGTCTTCGCTCGCAATTTGGGCCTGA 1497 0.5251 MGFSGKLCGMKVVVSDSDLQKSEKLGVKEWFGKNHFESRCGIDSGSIDMLSEEAICISNSDHSASATSFWSVNGKTDAQLHCPVKEKKRIKHIRICGRCSTNWLETLLSFQKPSFFHNLLESMTNSTCAGAEFDQCRDESAALVLKFVAIASILLSGMAGIAIPLVGKHRRFLRTDGNLFVGAKAFAAGVILATGFVHMLSDATDALQHPCLPSFPWSKFPFTGFFAMMAALFTLLLDFVGTQYYERKQGLNRPSEEQSRVGSSESGGKVFGEEESGGMHIVGMHAHAAHHRHNHPHGHDSCHGIGGEKEQDNALADSHGHGHGHLHGHSHMEDVEETDVRHVVVSQVLELGIVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKASSATIMACFFALTTPLGVSIGTAISSRFNPYSPGALITEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIASYCMLFLGAGLMSSLAIWA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02132 498 PANTHER ZINC/IRON TRANSPORTER 142 491 - -
Vian4g02132 498 Pfam ZIP Zinc transporter 145 495 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vian4g02132 498 NCBIfam ZIP zinc/iron transport family 129 498 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vian4g02132 498 MobiDBLite consensus disorder prediction 249 270 - -
Vian4g02132 498 MobiDBLite consensus disorder prediction 290 331 - -
Vian4g02132 498 MobiDBLite consensus disorder prediction 299 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02132 Vian-Chr4 38149454 38155927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02132 124 498 Inorganic Solute Cotransporters AT1G60960 72.093 9.30e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02132 K14709 - gmx:100812212 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00590 7 13757292 13761454 Vian4g02132 4 38149454 38155927 PCT