Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02126 ATGGACTTGGCATGGTGGTTTCCACTTCCATGTCTCCTTTCTGCTTCAACAATGTTTACCTTGCTGGCTTTAACAGGAGGCTTGTTCGTATATCTGTATGCACCTTATTGGGGTGTAAGGAAGGTTCCAGCTCCACCTTCTTTGCCTCTTGTAGGACACCTTCCCTTGCTGGCTAAATATGGTCCTGATGTCTTCTCAGTCCTTGCCAAACAATACGGTCCCATTTACAGATTCCATATGGGGAGACAACCACTAATAATTATAGCAAATGCAGAGCTGTGCAAAGAAGCTGGAATTAAGAAATTCAAAGATATTTCAAACAGAAGTATTCCATCACCAATATCTGCTTCTCCTCTTCACCAGAAGGGTCTCTTCTTCAGCAGGGACTCACAATGGTCTACCATGCGAAACACTATACTATCGATCTACCAACCATCACACTTATCCGGATTAGTGCCACTGATGCAGTCTTTCATAGAATCTGCCACTGAAAACCTTGACTCTGAAAAAGAAGACATTGTTTTTTCCAACTTGTCCCTCAGACTTGCAACTGATGTGATTGGGCAGGCAGCATTTGGTGTGAACTTTGGTCTTTCTAGACCCAATTCAGTTTGTGATTCTATCAAGAGTGTTGACACTGACCCTGCAACTCCTGCTAATGACAATGAAGTATCCGATTTCATCAACCAGCACATATACTCCACTACACAACTCAAGATGGACTTGTCTGGTTCCTTCTCCATTATATTGGGTCTGCTTTTGCCAATACTTCAAGAGCCGTTTAGGCAGATTCTGAAGAGAATTCCAGGAACCATGGACTGGAAGATTGAGCGTACAAACCAAAAACTAAGTGGCCGTCTTGATGACATTGTAGAAAAAAGAATGAAAGATAAGACCCCAAGTTCAAAGGATTTCTTGTCACTCATACTTAATGCCAGAGAAACAAAAGCAGTTTCAGAGAATGTCTTCACACCAGACTACATCAACGCAGTTACTTACGAGCATCTGCTTGCTGGTTCGGCAACCACCTCCTTTACCTTGTCTTCTGTTATCTATTTGGTTGCTGGACATCCTCAAGTTGAGAAAAAATTGCTTCATGAGATAGATGCCTTTGGTCCTGTCGATAAGATTCCGACTTCTCAAGATCTTCGTGACAACTTCCCTTATCTTGATCAGGTGATCAAAGAGGCAATGAGATTTTACACTGTATCTCCATTAGTTGCTAGAGAAACATCAAATGAAGTGGAGATTGGAGGCTATCTTCTCCCAAAGGGGACTTGGGTGTGGTTAGCACTTGGAGTTGTGGCAAAAGATCCCAAGGACTTTCCAGAGCCAGAAAAGTTCAAACCAGAGAGGTTTGACCCCAACTGTGAAGAAATGAAACGAAGGCATCCTTATGCTTTTATACCATTTGGAATTGGTCCTCGAGCATGCATTGGCAAACAATTTTCCCTACAAGAGATCAAGCTTTCTCTCATTCATTTATATCGGAAATACTTGTTTCGGCATTCACCAAATATGGAAAACCCCTTGGAACTCCAGTATGGGATAGTCCTCAACTTCAAGCATGGGGTCAAGCTCAGAGCCATAAAAAGAACACAAAGTTACTAA 1611 0.4227 MDLAWWFPLPCLLSASTMFTLLALTGGLFVYLYAPYWGVRKVPAPPSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIANAELCKEAGIKKFKDISNRSIPSPISASPLHQKGLFFSRDSQWSTMRNTILSIYQPSHLSGLVPLMQSFIESATENLDSEKEDIVFSNLSLRLATDVIGQAAFGVNFGLSRPNSVCDSIKSVDTDPATPANDNEVSDFINQHIYSTTQLKMDLSGSFSIILGLLLPILQEPFRQILKRIPGTMDWKIERTNQKLSGRLDDIVEKRMKDKTPSSKDFLSLILNARETKAVSENVFTPDYINAVTYEHLLAGSATTSFTLSSVIYLVAGHPQVEKKLLHEIDAFGPVDKIPTSQDLRDNFPYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVVAKDPKDFPEPEKFKPERFDPNCEEMKRRHPYAFIPFGIGPRACIGKQFSLQEIKLSLIHLYRKYLFRHSPNMENPLELQYGIVLNFKHGVKLRAIKRTQSY 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02126 536 Gene3D Cytochrome P450 28 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02126 536 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02126 536 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02126 536 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02126 536 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02126 536 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02126 536 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02126 536 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02126 536 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02126 536 SUPERFAMILY Cytochrome P450 35 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02126 536 PANTHER THROMBOXANE-A SYNTHASE 17 533 - -
Vian4g02126 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Vian4g02126 536 PRINTS P450 superfamily signature 478 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02126 536 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02126 536 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02126 536 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02126 536 Pfam Cytochrome P450 43 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02126 Vian-Chr4 38092744 38099141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02126 80 532 Cytochrome P450 AT2G26170 73.951 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02126 K20771 - gmx:100797803 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02126 4 38092744 38099141 Vian4g02126 4 38092744 38099141 ECH
Vian7g00576 7 13551628 13555030 Vian4g02126 4 38092744 38099141 PCT