Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02125 ATGGGTGCATCAGGAAAATGGGTGAAGGCTTTAATCGGACTCAAGAAACCAGACAAGGACGAACATGTGAAAGAGGGTGGTAAGAGCAAGAAGTGGAGGCTATGGAGGAGTTCTTCTGGGGATGTGGGTTCTTGGAAGGCTATCAAAGGAAACCACCACAAAGCAGCTTCTGAAGGGTCTGATTCTCCACCTGTTGTAGCAGCAGATGCTTACACGGCCGCAGTAGCCACTGTGGTTCGAGCACCACCTAAGGATTTCAGACTCGTCAAGCAAGAATGGGCCGCCATAAGAATCCAAACTGCCTTCCGTGCCTTCTTGGCAAGAAGGGCTTTGAGGGCATTGAAAGGAGTGGTGAGGATTCAAGCTCTTGTTCGGGGGAGACAGGTGAGGAAACAAGCTGCGGTGACACTTAGGTGTATGCAGGCCTTGGTTCGGGTTCAGGCCCGTGTAAGAGCTCGTCGTGTGAGAATGTCCATAGAGGGGCAAGCTGTGCAGAACATGCTTAATGAAAGGCGCAGTAAGCTTGAACTTTTGAAGCAAGCTGAGGAAGGATGGTGTGACAGCAGAGGAACTGTGGAAGATGTTAAAGCAAAGATTCAGATGAGGCAAGAAGGAGCTTTCAAAAGGGAAAGAGCAATTGCTTACTCTCTTGCTCAAAAGCAATGCAGATCAACCTCAAGTTATAATTATCGAACTACTGGCTCTGTTTCCTCTCTGAAGAGCCATGAGATTAACAAAGCTAACTGGGGGTGGACTTGGTTGGAGCGTTGGATGGCAGCCAAGCCTTGGGAGAGTAGATTGATGGAGCAATCTCAGGCTGAAGGCTTGTTAGATAAAACCCCACATGCAAAGAAGTTTGAAGAATCCTTTGTGAACTCTAATTCCAAATCATGTTTGGTCAAAGTCAAGAAGAACAACATGACAACAAGGGTTTCTGCTAGGCCTCCCCATTTTGGCCAAGCTACTCGTTCATCCTCAAGTCCAAGTTCTGAGTTTCGATATGATGAGAGTTCTGCATCATCTTCCATTTGTACATCTACAACACCAATGTCTGGGAACACTTGTGACAGGACTGATGACAGTAATGGTAATGCTGTTGCTAGGCCTAATTACATGAACCTGACTCAGTCCACAAAGGCAAAGCTAAAGACAAGTAGTAATCATGTGTATAATAGAGCTCAAAGGCAACAGTCCATGGATGAGTTTCAATTTCTCAAGAGGGCAGCGGTTTTCTCCAATGGAGATTCCAAAAGCACTACAGCTTCTGACCCTTCAATCAACCTTTCTAGGCCACTTCACTTGGACAAGAGCTCGGTGAGGCTACGGTGA 1329 0.4673 MGASGKWVKALIGLKKPDKDEHVKEGGKSKKWRLWRSSSGDVGSWKAIKGNHHKAASEGSDSPPVVAADAYTAAVATVVRAPPKDFRLVKQEWAAIRIQTAFRAFLARRALRALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNMLNERRSKLELLKQAEEGWCDSRGTVEDVKAKIQMRQEGAFKRERAIAYSLAQKQCRSTSSYNYRTTGSVSSLKSHEINKANWGWTWLERWMAAKPWESRLMEQSQAEGLLDKTPHAKKFEESFVNSNSKSCLVKVKKNNMTTRVSARPPHFGQATRSSSSPSSEFRYDESSASSSICTSTTPMSGNTCDRTDDSNGNAVARPNYMNLTQSTKAKLKTSSNHVYNRAQRQQSMDEFQFLKRAAVFSNGDSKSTTASDPSINLSRPLHLDKSSVRLR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02125 442 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Vian4g02125 442 PANTHER IQ-DOMAIN 5-RELATED 1 411 - -
Vian4g02125 442 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Vian4g02125 442 MobiDBLite consensus disorder prediction 308 368 - -
Vian4g02125 442 Pfam Protein of unknown function (DUF4005) 335 414 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02125 Vian-Chr4 38090241 38092254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02125 1 432 IQD Protein Family AT2G26180 60.369 1.02e-149 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02125 - - gmx:100799714 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00575 7 13548633 13550896 Vian4g02125 4 38090241 38092254 PCT