Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02111 ATGAGTGGTGATAATACAAAACCATCAGATTCACCTGAGAGTGATTTCACCAAGCAATGGCCTTCGGAGCTCTCCGAGTACCTGAATTTAGATGATGATCAATGGTCATACGATGATCTCGATTCATTTGTTTCAGGGCATGTTTTCAGCCATAAGACTGAAGCCAATGAAGTTGGTGAGCTTGGAGGAAGTAGCACCCACCATGAAGAGTTTTCTATCAGAGACGATGGTAATGAACATGAGAAGAAGGAAGTGAGAGATAGAGTTGCGTTCAAAACAAAGTCAGAGATAGAAATAATGGATGACGGGTTCAAGTGGAGGAAGTACGGAAAAAAGATGGTGAAAAACAGCCCAAATCCAAGGAACTACTACAGGTGTTCAGTGGAGGGATGTTCAGTGAAGAAGGTAGTTGAAAGGGACAAGGATGATCCGAGTCTGCATGTGCTCTTCCCAAGTGTTATGTGGTAA 468 0.4295 MSGDNTKPSDSPESDFTKQWPSELSEYLNLDDDQWSYDDLDSFVSGHVFSHKTEANEVGELGGSSTHHEEFSIRDDGNEHEKKEVRDRVAFKTKSEIEIMDDGFKWRKYGKKMVKNSPNPRNYYRCSVEGCSVKKVVERDKDDPSLHVLFPSVMW 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02111 155 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 57 146 IPR044810 GO:0003700
Vian4g02111 155 MobiDBLite consensus disorder prediction 1 20 - -
Vian4g02111 155 ProSiteProfiles WRKY domain profile. 95 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian4g02111 155 SMART WRKY_cls 100 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian4g02111 155 Gene3D WRKY domain 87 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian4g02111 155 MobiDBLite consensus disorder prediction 63 85 - -
Vian4g02111 155 Pfam WRKY DNA -binding domain 101 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian4g02111 155 MobiDBLite consensus disorder prediction 57 85 - -
Vian4g02111 155 SUPERFAMILY WRKY DNA-binding domain 93 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02111 Vian-Chr4 37952371 37953138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02111 26 148 WRKY Transcription Factor Family AT5G26170 53.571 8.40e-36 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian4g02111 WRKY 2.8e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02111 - - gmx:100819462 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02111 4 37952371 37953138 Vian4g02111 4 37952371 37953138 ECH