Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02094 ATGAAAGACTGTATCCAAAAGGCATTATCAAAAACTATCTCCCTTGACCATCAGATCATCCCTCGAGTCGTCCCTTTCATGCACCAAATCGTTCAGCAACATGGTAAGATTTCACTGTGTTGGTTTGGAAGAACACCAAGACTCATAATAGCAGATGCAGAGCTCACACGATCGATTTTAACAAACACGAAAGGGCACTTTCTGAAGCCACCACGATTGTCTTCGTTAGAAGGCGAAATTTGGAGCAAACGCAGAAGGGTGGTAAATTCAGCTTTCCACCTTGAGAAGTTGAAGGCAATGATGCCAGCATTTTCAATCAGCTGTAACAACATGATCGAGCGATGGGAGAAATTAGTAGAAGCTCGTGGATGGTATGAATTGAATGTTTGTTCAGAATTCCACATTCTTACTGGTGATGTGATAGCTCGAACAGCCTTTGGAAGTAACTACCAAGAGGGAAAGAAAATTTTTGAACTGCAAAAGGAGCAAGCAATCTTGGTCAACGAAGCCCTCAACAACATCTATATCCCAGGTTACAGATTTTTACCAACCACAAAGAACAAGCGCAGGTACAACCTAGATATCCAAATCAAAGCTATGTTACGAGATATGATACAGAAGAAAGAACAGGCAATGAAAGAGAATAAAGTGAAAGAGCATGATTTATTAAGTTCACTGCTACAGTATAGGGAAGAAAGTGGTTCTTTAACAACAGATAATGTGATTGAAGAATGCAAGTTGTTTTACTTTGCCGGCCAAGTGACCACGGCCAACTTGCTTTCATGGACTATGATTGTTTTATCTATGCATCCAAATTGGCAAGAGAAGGCAAGAACAGAGGTGTTGAAGATTTTTGGCAAAAAAACACTTGACTATGAAGACATTAATCACCTCAAGATTGTAAGTTCATTGTCTGTTGTTGTTGTTGTTGTAATGATTAGTTTGAAGAAAGAAGAAAAAAATGACCACCAAGTGTTTGACTATATGCAGGTGTCAATGATACTGTATGAAGTTTTGAGATTATACCCTCCTCTGGTAAACATCAACAAATACAATTGGTGTGAAACAAGAGTGGGAAACATTTCCATTCCAGCAGGGGTTGAACTGTGTTTACCTTTGTTACTTCTTCATTATGACAGTAACTATTGGGATGAGCCTGAAGAGTTCAACCCAGGTAGATTCAGTGAAGGGATTTCAAAAGCTTCAAAGGATCATATCGCTTTCTATCCATTTGGTGGGGGCTCAAGAATTTGTCCTGGCCAAAACTTTGCCATCTTAGAAGCAAAGATGGCTCTGGCTTTCATTCTTCAACACTTCTCTTTCCAACTCTCACCCACTTATGCTCATGCTCCAGCAACTTCTACTATTACTCTCACGCCACAGCATGGTGCTCCCATTATTATTCGTCGCACTTAG 1416 0.4004 MKDCIQKALSKTISLDHQIIPRVVPFMHQIVQQHGKISLCWFGRTPRLIIADAELTRSILTNTKGHFLKPPRLSSLEGEIWSKRRRVVNSAFHLEKLKAMMPAFSISCNNMIERWEKLVEARGWYELNVCSEFHILTGDVIARTAFGSNYQEGKKIFELQKEQAILVNEALNNIYIPGYRFLPTTKNKRRYNLDIQIKAMLRDMIQKKEQAMKENKVKEHDLLSSLLQYREESGSLTTDNVIEECKLFYFAGQVTTANLLSWTMIVLSMHPNWQEKARTEVLKIFGKKTLDYEDINHLKIVSSLSVVVVVVMISLKKEEKNDHQVFDYMQVSMILYEVLRLYPPLVNINKYNWCETRVGNISIPAGVELCLPLLLLHYDSNYWDEPEEFNPGRFSEGISKASKDHIAFYPFGGGSRICPGQNFAILEAKMALAFILQHFSFQLSPTYAHAPATSTITLTPQHGAPIIIRRT 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02094 471 Gene3D Cytochrome P450 21 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02094 471 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 464 - -
Vian4g02094 471 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02094 471 PRINTS E-class P450 group I signature 260 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02094 471 PRINTS E-class P450 group I signature 31 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02094 471 PRINTS E-class P450 group I signature 240 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02094 471 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02094 471 PRINTS E-class P450 group I signature 136 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02094 471 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02094 471 SUPERFAMILY Cytochrome P450 16 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02094 471 Coils Coil 201 221 - -
Vian4g02094 471 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02094 471 PRINTS P450 superfamily signature 251 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02094 471 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02094 471 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02094 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Vian4g02094 471 Pfam Cytochrome P450 332 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g02094 471 Pfam Cytochrome P450 26 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02094 Vian-Chr4 37787164 37789166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02094 5 467 Cytochrome P450 AT3G14620 43.606 2.41e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02094 - - aip:107623710 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02094 4 37787164 37789166 Vian4g02094 4 37787164 37789166 ECH