Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02085 ATGCTGGAAAGATTTAAGCAACAACTGCAAGCACTCATGGAAACGCTTAACACAACAGAACCTCATTACATTCGATGTGTCAAGCCAAGTTCTTTGAATCGACCACAAAAGTTTGAGAATACTAGTGTCATACACCAATTACGTTGTGGGGGTGTCCTTGAGGCTGTTAGAATAAGTCTGGCAGGTTACCCCACTCGTAGGATTTACTCAGAGTTTGTAGACCGCTATGGATTAATAGCTCCCGAATTTATGGATGAAAGTTACGATGATAAAGCTGTAACTCTGAAAATATTGCAAAAGCTAAAGCTTGAGAATTTTCAGTTAGGTAGGACCAAAGTGTTTCTGAGGGCCGGTCAAATTTGCATTTTAGACTCTAGACGTGCAGAAGTTTTGGACAATGCTGCAAAATGTATTCAGCGTCAACTGCGGATGTTCATTGCTCGCAGGGATTTCATGTCAATTCGTGCTGCTACACTTTCTCTTCAAGCATGCTGCAGGGGTTGCATTAGCCGAAAGATATATGCTTCTAAGCGGGAGACAACAGCAGCTATTTCCATTCAAAAATACACCCGTATGTGTCTGATGAGACATGCTTATGTGAAATTGTGTTATTCTGCTATTATTGTACAATCCAATGTTCGTGGTTTCACAACTCGACAAAGGTTCTTGCATAGAAAGGAGCACAAAGCTGCTGCTTACATTCAGGCCTGTTGGAGGATGTGCAAGGTTCGATCTGCATTCGTAAAACATCAAAATTCAATTGTAGCAATGCAATGCCTTTGGCGATGCAGACAAGCAAAAAGAGAGCTCCGTAGACTTAAGCAAGAAGCTAATGAAGCTGGAGCCTTGCGTTTAGCTAAGAATAAACTTGAGAAACAATTGGAAGAGCTTACATGGCGTTTGCATCTAGAGAAAAAAATTAGGATTTCTAATGAAGAGGTTAAGCATGTTGAGATTTCCAAATTACAGAAGATGGTAGAGGCTCTGAATGTTGAATTAGATGCAGCTAAACTTGCAACAATTAATGAGTGCAACAGAAATGCAGTTTTGCAAAATCAGTTGCAATTATCAGTAAAGGAAAAATCTTCTTTAGAAAGAGAGCTAGTTGCAATGGATGAAGTGCAAAAGGAAAATGCTCAATTAAAGGGTTCACTGGAGGCTTTTGAAAAGAAGAGCATGACTTTGGAGCTTGAGCTTGTTAGTGCTCGGAAAGACCATGACAAAACCATTCTGAAAATGAGGGAGTTTGAACACAAGTGTTCTCAACTTGGGCAAGATATGAAAAGCCTCCAGGAAAAGCTATTTAGTTTAGAGGATGAAAATCACGTGCTTCGTCAGAAAGCCTTAACAGTATCTCCTAAGAGTAACTATCGAGGTTTAACAAAGTCATTTTCAGAAAAACAATCAAATGCAGTAGCTCCCCGCACTGATCAAAAGCCCATATTTGAATCGCCCACACCTACAAAACTTATTTCCCCTTTTACACATGGAAGTTTCTCAGACTCTCGTAGATCAAAATTAACGGCAGAGAGGCACCAGGATAACAATGAACTCCTCTCTAGGTGTATTAAAGATGATTTGGGGTTCAAAAATGGTAAACCTCTGGCAGCTTGTATCATATACAAATGTCTTCATCATTGGCATGCCTTTGAATCTGAGCGCACGGCCATATTTGATTACATTGTTGATGGAATTAATGATGTCCTAAAGGTTAGAGACGATGACATTATCTTGCCGTATTGGCTGTCCAATACATCTGCACTTCTATGCCTCTTGCAAAGGAACTTGCATTCAAATGGCTTTTTAACAGCCACTGCTCAACGTTATGCCAGATCATCTGGCTTGACCAGCCGAATTGGGCATAAGCTGAGGTCTCCATTGAAGCTTATTGGATATGATGATAGTACAGTACATGTGGAAGCAAGATATCCAGCTATACTTTTTAAACAACAGCTAACTGCTTGTGTAGAGAAGATTTTTGGCCTTATACGTGATAATTTGAAAAAGGAGCTTTCTCCACTTCTGGCATCATGTATTCAGGCACCTAAAACAGGTCGGATGCTAGGTGGAAAATTATCTAAGTCTCCTGGTGTGCTTCCTCCACAATCACCTGTTGCTCAATGGGACAACATCATCAAATTTTTGGATTCACTCATGAGCAGAATGCGCGTGAATCATGTACCATCCTTTTTCATCCGCAAGCTGGTTACTCAGGTTTTTTCCTTCATCAACATTACACTCTTCAATAGCCTTCTGTTGCGTCGCGAATGTTGCACTTTCTCAAATGGTGAATATGTAAAGTCTGGGCTTGCAGAACTGGAGAAATGGATAGTTAATGCAAAGGAGGAGTATGCAGGAACATCCTGGCACGAACTGAACTATATAAGGCAAGCTGTTGGGTTTCTGGTAATACACCAGAAGAGAAAAAAATCTTTGGAAGAAATTAGGCAGGATCTTTGTCCGGCATTAACAGTGAGGCAAATTTATCGGATCTGTACAATGTACTGGGACGACAAATATGCAACCCAAAGTGTATCCAACGAGGCAATTAATGAAATGAGAGAAATTGTGAGCAGCGACAATCAGAGTTTGACAACTAATTCTTTCTTGTTGGACGATGATATGAGCATTCCTTTTTCTGCTGAAGACATAGATATGGCAATCCCTGCTATAAATACCGATGATATCGATCCCCCAGCATTTTTGTGCGAATATCCCTGTGCCCAGTTTCTTACTTTACATGAGAAATAA 2751 0.4035 MLERFKQQLQALMETLNTTEPHYIRCVKPSSLNRPQKFENTSVIHQLRCGGVLEAVRISLAGYPTRRIYSEFVDRYGLIAPEFMDESYDDKAVTLKILQKLKLENFQLGRTKVFLRAGQICILDSRRAEVLDNAAKCIQRQLRMFIARRDFMSIRAATLSLQACCRGCISRKIYASKRETTAAISIQKYTRMCLMRHAYVKLCYSAIIVQSNVRGFTTRQRFLHRKEHKAAAYIQACWRMCKVRSAFVKHQNSIVAMQCLWRCRQAKRELRRLKQEANEAGALRLAKNKLEKQLEELTWRLHLEKKIRISNEEVKHVEISKLQKMVEALNVELDAAKLATINECNRNAVLQNQLQLSVKEKSSLERELVAMDEVQKENAQLKGSLEAFEKKSMTLELELVSARKDHDKTILKMREFEHKCSQLGQDMKSLQEKLFSLEDENHVLRQKALTVSPKSNYRGLTKSFSEKQSNAVAPRTDQKPIFESPTPTKLISPFTHGSFSDSRRSKLTAERHQDNNELLSRCIKDDLGFKNGKPLAACIIYKCLHHWHAFESERTAIFDYIVDGINDVLKVRDDDIILPYWLSNTSALLCLLQRNLHSNGFLTATAQRYARSSGLTSRIGHKLRSPLKLIGYDDSTVHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLASCIQAPKTGRMLGGKLSKSPGVLPPQSPVAQWDNIIKFLDSLMSRMRVNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRICTMYWDDKYATQSVSNEAINEMREIVSSDNQSLTTNSFLLDDDMSIPFSAEDIDMAIPAINTDDIDPPAFLCEYPCAQFLTLHEK 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02085 916 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 176 IPR027417 -
Vian4g02085 916 Coils Coil 319 339 - -
Vian4g02085 916 ProSiteProfiles IQ motif profile. 131 160 IPR000048 GO:0005515
Vian4g02085 916 Pfam DIL domain 735 838 IPR002710 -
Vian4g02085 916 ProSiteProfiles IQ motif profile. 250 279 IPR000048 GO:0005515
Vian4g02085 916 PANTHER MYOSIN 3 848 - -
Vian4g02085 916 Coils Coil 413 447 - -
Vian4g02085 916 ProSiteProfiles IQ motif profile. 204 231 IPR000048 GO:0005515
Vian4g02085 916 CDD MyosinXI_CBD 510 882 IPR037975 GO:0007015
Vian4g02085 916 ProSiteProfiles Dilute domain profile. 559 859 IPR002710 -
Vian4g02085 916 SMART DIL_2 734 841 IPR002710 -
Vian4g02085 916 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 277 IPR027417 -
Vian4g02085 916 Gene3D - 3 19 - -
Vian4g02085 916 MobiDBLite consensus disorder prediction 463 485 - -
Vian4g02085 916 Pfam IQ calmodulin-binding motif 133 151 IPR000048 GO:0005515
Vian4g02085 916 Pfam IQ calmodulin-binding motif 205 222 IPR000048 GO:0005515
Vian4g02085 916 Pfam IQ calmodulin-binding motif 228 247 IPR000048 GO:0005515
Vian4g02085 916 Pfam IQ calmodulin-binding motif 182 199 IPR000048 GO:0005515
Vian4g02085 916 Coils Coil 371 405 - -
Vian4g02085 916 Gene3D - 63 129 - -
Vian4g02085 916 Gene3D - 181 229 - -
Vian4g02085 916 Gene3D - 130 180 - -
Vian4g02085 916 Gene3D - 230 278 - -
Vian4g02085 916 Coils Coil 347 367 - -
Vian4g02085 916 Coils Coil 256 307 - -
Vian4g02085 916 SMART iq_5 201 223 IPR000048 GO:0005515
Vian4g02085 916 SMART iq_5 178 200 IPR000048 GO:0005515
Vian4g02085 916 SMART iq_5 130 152 IPR000048 GO:0005515
Vian4g02085 916 SMART iq_5 249 271 IPR000048 GO:0005515
Vian4g02085 916 SMART iq_5 153 175 IPR000048 GO:0005515
Vian4g02085 916 SMART iq_5 226 248 IPR000048 GO:0005515
Vian4g02085 916 ProSiteProfiles IQ motif profile. 154 183 IPR000048 GO:0005515
Vian4g02085 916 Gene3D Kinesin motor domain 20 62 IPR036961 -
Vian4g02085 916 Pfam Myosin head (motor domain) 4 116 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian4g02085 916 ProSiteProfiles Myosin motor domain profile. 1 128 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02085 Vian-Chr4 37682081 37699795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02085 4 912 Myosins gene family AT4G33200 66.484 0.0 1226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02085 K10357 - gmx:100796413 1624.37